RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 RPL39P5Q59GN2 51 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 BHLHA15Q7RTS1 189 aaPredicted RBP7.13□□□□□ -1.27
RFX3-202ENST00000358730 OR5T1Q8NG75 326 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 OR51G1Q8NGK1 321 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 Q8TCH9 128 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 PACRGQ96M98 296 aaPredicted RBP7.13□□□□□ -1.27
RFX3-202ENST00000358730 PLSCR4Q9NRQ2 329 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 PITPNC1Q9UKF7 332 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 WDR83OSQ9Y284 106 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 PROP1O75360 226 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 TNFSF13O75888 250 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 HRASP01112 189 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 CRYAAP02489 173 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 WT1P19544 449 aaPredicted RBP7.13□□□□□ -1.27
RFX3-202ENST00000358730 UBE2G2P60604 165 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 ERVK-16P61578 105 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 LRP11Q86VZ4 500 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 Q8N7P7 452 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 HEYLQ9NQ87 328 aaPredicted RBP7.13□□□□□ -1.27
RFX3-202ENST00000358730 ZNF71Q9NQZ8 489 aaPredicted RBP7.13□□□□□ -1.27
RFX3-202ENST00000358730 GFOD1Q9NXC2 390 aa7.13□□□□□ -1.27
RFX3-202ENST00000358730 MGST3O14880 152 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 GZMHP20718 246 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 SPCS3P61009 180 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 RPP30P78346 268 aaKnown RBP7.12□□□□□ -1.27
RFX3-202ENST00000358730 MSMPQ1L6U9 139 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 CST9LP1Q5W188 147 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 ZNRF1Q8ND25 227 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 PPP1R35Q8TAP8 253 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 STARD4Q96DR4 205 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 DIRC2Q96SL1 478 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 HIST1H2BLQ99880 126 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 PCGF1Q9BSM1 259 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 BOD1L1Q8NFC6 3051 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 A0A1W2PPV4 95 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 ATP5G3P48201 142 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 ZNF83P51522 516 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 IGFL2Q6UWQ7 119 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 TGIF2LYQ8IUE0 185 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 GCSAMQ8N6F7 178 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 S100PBPQ96BU1 408 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 ANAPC16Q96DE5 110 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 SDSLQ96GA7 329 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 OR2V2Q96R30 315 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 IFI27L2Q9H2X8 130 aa7.12□□□□□ -1.27
RFX3-202ENST00000358730 PATZ1Q9HBE1 687 aaKnown RBP7.12□□□□□ -1.27
RFX3-202ENST00000358730 EP300Q09472 2414 aaPredicted RBP7.12□□□□□ -1.27
RFX3-202ENST00000358730 A0A1B0GWJ7 208 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 ZNF729A6NN14 1252 aaPredicted RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 FAM90A9PA6NNJ1 464 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 RRHO14718 337 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 YPEL1O60688 119 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 HIST1H1BP16401 226 aaKnown RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 NPPCP23582 126 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 P2RY6Q15077 328 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 AARDQ4LEZ3 155 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 VHLLQ6RSH7 139 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 MOGAT3Q86VF5 341 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 FAM90A1Q86YD7 464 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 TMEM183AQ8IXX5 376 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 DEFB124Q8NES8 71 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 YPEL2Q96QA6 119 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 S1PR3Q99500 378 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 PRDM13Q9H4Q3 707 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 TMEM140Q9NV12 185 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 DKK4Q9UBT3 224 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 SLC25A15Q9Y619 301 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 TRAV3A0A0B4J244 114 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 SPAARA0A1B0GVQ0 90 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 M0R1B8 84 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 PDE6DO43924 150 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 NDUFS6O75380 124 aaKnown RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 VENTXO95231 258 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 LY86O95711 162 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 ZNF134P52741 427 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 LOXL3P58215 753 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 FAM3BP58499 235 aaPredicted RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 PDLIM3Q53GG5 364 aaPredicted RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 SPRNQ5BIV9 151 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 C1orf174Q8IYL3 243 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 LEAP2Q969E1 77 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 ASCL3Q9NQ33 180 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 CALYQ9NYX4 217 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 ICE1Q9Y2F5 2266 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 CNOT1A5YKK6 2376 aaKnown RBP7.11□□□□□ -1.27
RFX3-202ENST00000358730 AHRRA9YTQ3 701 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 SLC31A2O15432 143 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 RBFOX2O43251 390 aaKnown RBP eCLIP7.11□□□□□ -1.27
RFX3-202ENST00000358730 MPDU1O75352 247 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 CGAP01215 116 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 FTH1P19P0C7X4 201 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 ARL14EPLP0DKL9 152 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 CHRNA7P36544 502 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 GNB1P62873 340 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 GAMTQ14353 236 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 DEFB109BQ30KR1 87 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 TREML4Q6UXN2 200 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 OR2T10Q8NGZ9 312 aa7.11□□□□□ -1.27
RFX3-202ENST00000358730 OR1P1Q8NH06 330 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms