RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 RNF114Q9Y508 228 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 SLIT3O75094 1523 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 CXorf51AA0A1B0GTR3 108 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 HLA-DQA1P01909 254 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 DAD1P61803 113 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 LINC00305Q7Z4B0 112 aa4.96□□□□□ -1.61
BRCA1-203ENST00000357654 DUSP15Q9H1R2 295 aaPredicted RBP4.96□□□□□ -1.61
BRCA1-203ENST00000357654 IGKV1D-42A0A075B6H8 117 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 IGHV1-45A0A0A0MS14 117 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 SMIM6P0DI80 62 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 RPS20P60866 119 aaKnown RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 SNRPEP62304 92 aaKnown RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 BAALCQ8WXS3 180 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 UQCC2Q9BRT2 126 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 SNHG12Q9BXW3 62 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 OR51M1Q9H341 326 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 FAM206AQ9NX38 181 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 IL19Q9UHD0 177 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 CTSBP07858 339 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 C1QTNF12Q5T7M4 302 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 C1orf122Q6ZSJ8 110 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 PPP1R32Q7Z5V6 425 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 LHFPL4Q7Z7J7 247 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 C10orf111Q8N326 155 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 GCSAMQ8N6F7 178 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 MYEOVQ96EZ4 313 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 HSPB9Q9BQS6 159 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV9-2A0A087WT02 112 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 EFEMP2O95967 443 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 MYOD1P15172 320 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 RCC1P18754 421 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 IL11P20809 199 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 IGFBP6P24592 240 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 SRSF6Q13247 344 aaKnown RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 C5orf47Q569G3 176 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 UNQ6494/PRO21346Q6UXR6 183 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 LRP10Q7Z4F1 713 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF275Q9NSD4 429 aaPredicted RBP4.96□□□□□ -1.62
BRCA1-203ENST00000357654 ELOVL5Q9NYP7 299 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 EMCNQ9ULC0 261 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 KCNK7Q9Y2U2 307 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 NWD2Q9ULI1 1742 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 TGIF2-C20orf24A0A0A6YYL0 155 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 HRKO00198 91 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 EVI2AP22794 236 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 PGFP49763 221 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 UNC119Q13432 240 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 DNM1P46Q6ZS02 220 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 ZNF645Q8N7E2 425 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 CLDND2Q8NHS1 167 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 ORAOV1Q8WV07 137 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 C19orf24Q9BVV8 132 aa4.96□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV8-2A0A0B4J237 113 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 MGST3O14880 152 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 CD5LO43866 347 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TMEM127O75204 238 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NDUFB4O95168 129 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 PPYP01298 95 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 STAG3L3P0CL85 134 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 OR9G1Q8NH87 305 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 GTF3AQ92664 365 aaKnown RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TBX21Q9UL17 535 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 RPL36A-HNRNPH2H7BZ11 118 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NDUFA2O43678 99 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 IFI27P40305 119 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 BAK1Q16611 211 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 CLPSL2Q6UWE3 100 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ALKAL1Q6UXT8 129 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TCF24Q7RTU0 167 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 LYZL2Q7Z4W2 148 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ZNRF1Q8ND25 227 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPCDR1Q9BY65 106 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 MMP26Q9NRE1 261 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 KCNE5Q9UJ90 142 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 hADV29S1A0JD25 119 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 LIPT2A6NK58 231 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TCRAP04437 139 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ERASQ7Z444 233 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPIPB3Q92617 1050 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ANGPTL4Q9BY76 406 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 COL16A1Q07092 1604 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 IGKV1OR2-108A0A075B7D4 117 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPIPB8E9PQR5 432 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPIPB9F8W1W9 429 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 J3QKU1 62 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 SPINT1O43278 529 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPIPB7O75200 414 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 C1orf220Q5T0J3 134 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 DRAM1Q8N682 238 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TEX45Q8NA69 505 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TAF15Q92804 592 aaKnown RBP eCLIP4.95□□□□□ -1.626e-6■□□□□ 11.2
BRCA1-203ENST00000357654 TMEM54Q969K7 222 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 WFIKKN1Q96NZ8 548 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 SF3B5Q9BWJ5 86 aaKnown RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 NPVFQ9HCQ7 196 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TMEFF2Q9UIK5 374 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-203ENST00000357654 TRAV14DV4A0A0A6YYC5 116 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 ZBTB42B2RXF5 422 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 PSPNO60542 156 aa4.95□□□□□ -1.62
BRCA1-203ENST00000357654 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms