RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 A0A1W2PPE3 182 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 REG1BP48304 166 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 SLC35B1P78383 322 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 FAM216AQ8WUB2 273 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 A0A0G2JK05 382 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 hCG_38984A0A1B0GV85 526 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF708P17019 499 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 GLRXP35754 106 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 OR10J6PQ8NGY7 276 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 IL36RNQ9UBH0 155 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 RNF115Q9Y4L5 304 aa10.04□□□□□ -0.8
COL9A1-202ENST00000357250 CHCHD2Q9Y6H1 151 aaPredicted RBP10.04□□□□□ -0.8
COL9A1-202ENST00000357250 WNT9BO14905 357 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 NKX2-8O15522 239 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
COL9A1-202ENST00000357250 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 PCSK4Q6UW60 755 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 FAM90A1Q86YD7 464 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TLNRD1Q9H1K6 362 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 AP5S1Q9NUS5 200 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 HSPB7Q9UBY9 170 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 THSD7BQ9C0I4 1608 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 PSMB2P49721 201 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 RND2P52198 227 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TIMM23BQ5SRD1 257 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF826PQ6ZT77 177 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 OR52M1Q8NGK5 317 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 VN1R17PQ8TDU5 208 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 DYNLRB2Q8TF09 96 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 RABAC1Q9UI14 185 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM238LA0A1B0GVL6 79 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 A6NJY4 79 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TGFBR3LH3BV60 316 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 C1QL1O75973 258 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 AGAP20933 346 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 UCP1P25874 307 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 CD40P25942 277 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 MAS1LP35410 378 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 RELBQ01201 579 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 C2orf68Q2NKX9 166 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF506Q5JVG8 444 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 MIC13Q5XKP0 118 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 ZNF818PQ6ZRF7 136 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 DRAM1Q8N682 238 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 PCGF1Q9BSM1 259 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TMEM70Q9BUB7 260 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 ATRXP46100 2492 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
COL9A1-202ENST00000357250 INTS1Q8N201 2190 aaKnown RBP10.03□□□□□ -0.8
COL9A1-202ENST00000357250 IGLV3-12A0A075B6K2 115 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 PGPA6NDG6 321 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TM4SF5O14894 197 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 RHBDL1O75783 438 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 SP9P0CG40 484 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 LOXL3P58215 753 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 WDR87Q6ZQQ6 2873 aa10.03□□□□□ -0.8
COL9A1-202ENST00000357250 SNRNP200O75643 2136 aaKnown RBP10.03□□□□□ -0.8
COL9A1-202ENST00000357250 TRGC2P03986 189 aa10.02□□□□□ -0.8
COL9A1-202ENST00000357250 AMY1AP04745 511 aa10.02□□□□□ -0.8
COL9A1-202ENST00000357250 EBLN2Q6P2I7 272 aa10.02□□□□□ -0.8
COL9A1-202ENST00000357250 C12orf54Q6X4T0 127 aa10.02□□□□□ -0.8
COL9A1-202ENST00000357250 SYT8Q8NBV8 401 aa10.02□□□□□ -0.8
COL9A1-202ENST00000357250 OSR1Q8TAX0 266 aaPredicted RBP10.02□□□□□ -0.8
COL9A1-202ENST00000357250 SIP14410 1827 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 B9A039 149 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 S1PR2O95136 353 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 GLIPR1P48060 266 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 CDCP2Q5VXM1 449 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 ZMAT5Q9UDW3 170 aaKnown RBP10.02□□□□□ -0.81
COL9A1-202ENST00000357250 TMEM56-RWDD3S4R434 201 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 C5orf52A6NGY3 159 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 ERASQ7Z444 233 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 FADS6Q8N9I5 356 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 OR8A1Q8NGG7 326 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 ZNF703Q9H7S9 590 aaPredicted RBP10.02□□□□□ -0.81
COL9A1-202ENST00000357250 DCAF16Q9NXF7 216 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 CARHSP1Q9Y2V2 147 aaKnown RBP10.02□□□□□ -0.81
COL9A1-202ENST00000357250 PAM16Q9Y3D7 125 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 SS18L1O75177 396 aaPredicted RBP10.02□□□□□ -0.81
COL9A1-202ENST00000357250 MGPP08493 103 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 TIMP4Q99727 224 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 C1QTNF5Q9BXJ0 243 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 CLEC7AQ9BXN2 247 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 OR51M1Q9H341 326 aa10.02□□□□□ -0.81
COL9A1-202ENST00000357250 DOCK9Q9BZ29 2069 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 ZG16O60844 167 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 F12P00748 615 aaPredicted RBP10.01□□□□□ -0.81
COL9A1-202ENST00000357250 NOTCH4Q99466 2003 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 RECKO95980 971 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 LIPFP07098 398 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 CDX1P47902 265 aaPredicted RBP10.01□□□□□ -0.81
COL9A1-202ENST00000357250 LCN2P80188 198 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 GTF3AQ92664 365 aaKnown RBP10.01□□□□□ -0.81
COL9A1-202ENST00000357250 HSPB9Q9BQS6 159 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 NEUROG3Q9Y4Z2 214 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 PKDREJQ9NTG1 2253 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 NPIPB6E9PJ23 425 aa10.01□□□□□ -0.81
COL9A1-202ENST00000357250 K7ERU9 68 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms