RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 JMJD8Q96S16 334 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 RARRES2Q99969 163 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 WNT5BQ9H1J7 359 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 VCX2Q9H322 139 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 LHFPL6Q9Y693 200 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 TRBV20OR9-2A0A075B6H5 130 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 PRR19A6NJB7 356 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 GFRA3O60609 400 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 ATP5LO75964 103 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 WISP3O95389 354 aaPredicted RBP5.53□□□□□ -1.52
UPF2-201ENST00000356352 TRGV3P03979 118 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 ARF6P62330 175 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 NRN1LQ496H8 165 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 ZNF826PQ6ZT77 177 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 OR13C6PQ8NH95 151 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 MEGF10Q96KG7 1140 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 NABP2Q9BQ15 211 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 PPP1R3EQ9H7J1 279 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 IGKV3D-11A0A0A0MRZ8 115 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 C7orf71A4D174 169 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 OR11H12B2RN74 326 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 PLAUP00749 431 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 IGKV3-11P04433 115 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 SOD3P08294 240 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 SMIM13P0DJ93 91 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 CXCL2P19875 107 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 NPBWR2P48146 333 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 Q6ZT83 130 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 NUDT10Q8NFP7 164 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 OR11H1Q8NG94 326 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 OR11H2Q8NH07 326 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 DNASE2BQ8WZ79 361 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 SFRP2Q96HF1 295 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 RTN4RQ9BZR6 473 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 CROCCQ5TZA2 2017 aa5.53□□□□□ -1.52
UPF2-201ENST00000356352 ZG16O60844 167 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 TSPAN13O95857 204 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 HLA-DQB1P01920 261 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 SNAI3Q3KNW1 292 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 GCSAMLQ5JQS6 135 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 FAM74A4Q5TZK3 123 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 BEND2Q8NDZ0 799 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 NEUROG1Q92886 237 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 SSBP3Q9BWW4 388 aaPredicted RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 PARLQ9H300 379 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 JKAMPQ9P055 326 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 HS3ST3B1Q9Y662 390 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 STRCQ7RTU9 1775 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 NPIPB9F8W1W9 429 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 NPIPB7O75200 414 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 ZNF883P0CG24 379 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 GCHFRP30047 84 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 SRIP30626 198 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 IGLV3-21P80748 117 aaPredicted RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 CD69Q07108 199 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 TMEM187Q14656 261 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 PCOLCEQ15113 449 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 TMEM190Q8WZ59 177 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 MS4A3Q96HJ5 214 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 TRAV9-1A0A075B6T8 112 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 TRGC2P03986 189 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 CELA2AP08217 269 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 GLRXP35754 106 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 LEPP41159 167 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 CYB5R2Q6BCY4 276 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 CFAP161Q6P656 301 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 SCARF2Q96GP6 870 aaPredicted RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 NRTNQ99748 197 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 CENPVL1A0A0U1RR11 272 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 DANCRP0C864 163 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 CRYBB3P26998 211 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 GPX4P36969 197 aaPredicted RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 LCN2P80188 198 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 C1QTNF12Q5T7M4 302 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 MBNL2Q5VZF2 373 aaKnown RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 LINC00305Q7Z4B0 112 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 SRXN1Q9BYN0 137 aa5.52□□□□□ -1.53
UPF2-201ENST00000356352 NPDC1Q9NQX5 325 aaPredicted RBP5.52□□□□□ -1.53
UPF2-201ENST00000356352 IGKV1-8A0A0C4DH67 115 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 A1L4Q6 167 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 GOLT1AQ6ZVE7 132 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 NEU1Q99519 415 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 SDF2L1Q9HCN8 221 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 DPM3Q9P2X0 92 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 SIRT4Q9Y6E7 314 aaPredicted RBP5.51□□□□□ -1.53
UPF2-201ENST00000356352 A0A1W2PP11 408 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 FOXI3A8MTJ6 420 aaPredicted RBP5.51□□□□□ -1.53
UPF2-201ENST00000356352 CACNG7P62955 275 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 C10orf126Q8N4M7 172 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 TMEM106BQ9NUM4 274 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 ZNF250P15622 560 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 ZNF818PQ6ZRF7 136 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 SLC25A45Q8N413 288 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 RFLNBQ8N5W9 214 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 LRTM2Q8N967 370 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 NUDT11Q96G61 164 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 ZNF414Q96IQ9 312 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 DUX3Q96PT4 197 aa5.51□□□□□ -1.53
UPF2-201ENST00000356352 PARD6GQ9BYG4 376 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms