RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
RTN3-205ENST00000356000 CHD7Q9P2D1 2997 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 RER1O15258 196 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 CLPSP04118 112 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 DEFA4P12838 97 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 IGLV3-21P80748 117 aaPredicted RBP13.22□□□□□ -0.29
RTN3-205ENST00000356000 KIR2DS3Q14952 304 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 LSM10Q969L4 123 aaKnown RBP13.22□□□□□ -0.29
RTN3-205ENST00000356000 SPACA9Q96E40 222 aaPredicted RBP13.22□□□□□ -0.29
RTN3-205ENST00000356000 SPATA25Q9BR10 227 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 TMEM147Q9BVK8 224 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 CD300LBA8K4G0 201 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 SPRY1O43609 319 aaPredicted RBP13.22□□□□□ -0.29
RTN3-205ENST00000356000 FTH1P19P0C7X4 201 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 TGFBR3Q03167 851 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 C17orf67Q0P5P2 114 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 ZNF788Q6ZQV5 615 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 MBD6Q96DN6 1003 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 PIGLQ9Y2B2 252 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 TSSC4Q9Y5U2 329 aaPredicted RBP13.22□□□□□ -0.29
RTN3-205ENST00000356000 CACNA1IQ9P0X4 2223 aa13.22□□□□□ -0.29
RTN3-205ENST00000356000 H3BUT2 72 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 SPINK4O60575 86 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 TUSC2O75896 110 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 APCSP02743 223 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 PIGYQ3MUY2 71 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 DTX1Q86Y01 620 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 OR10AG1Q8NH19 301 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 RAB1CQ92928 201 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 UNC80Q8N2C7 3258 aa13.21□□□□□ -0.29
RTN3-205ENST00000356000 CRYGCP07315 174 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 GRB2P62993 217 aaKnown RBP13.21□□□□□ -0.3
RTN3-205ENST00000356000 RPL24P83731 157 aaKnown RBP13.21□□□□□ -0.3
RTN3-205ENST00000356000 RAB31Q13636 194 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 PRAMEF5Q5TYX0 476 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 PRAMEF6Q5VXH4 476 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 Q6ZSR3 168 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 ASCL5Q7RTU5 278 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 TAAR6Q96RI8 345 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 NPCDR1Q9BY65 106 aa13.21□□□□□ -0.3
RTN3-205ENST00000356000 C9JCJ5 164 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 PDCD6O75340 191 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 Q6ZS49 121 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 OR1L1Q8NH94 360 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 EMC6Q9BV81 110 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 THADAQ6YHU6 1953 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 H0YIG0 161 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 P2RY2P41231 377 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 MEF2CQ06413 473 aaPredicted RBP13.2□□□□□ -0.3
RTN3-205ENST00000356000 TMEM97Q5BJF2 176 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 C2orf91Q6ZV80 131 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 H1FNTQ75WM6 255 aaPredicted RBP13.2□□□□□ -0.3
RTN3-205ENST00000356000 VSTM2AQ8TAG5 236 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 PERPQ96FX8 193 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 MS4A6AQ9H2W1 248 aa13.2□□□□□ -0.3
RTN3-205ENST00000356000 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 PSG2P11465 335 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 CCNOP22674 350 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 HTR1DP28221 377 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 IL12BP29460 328 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 TFF3Q07654 80 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 MALLQ13021 153 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 KLF5Q13887 457 aaPredicted RBP13.19□□□□□ -0.3
RTN3-205ENST00000356000 WDR54Q9H977 334 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 TNFRSF19Q9NS68 423 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 SIT1Q9Y3P8 196 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 A0A0G2JLM5 398 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 CEACAM5P06731 702 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 CISD3P0C7P0 127 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 CD1BP29016 333 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 PPOXP50336 477 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 SLC23A3Q6PIS1 610 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 Q6ZSR6 202 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 OSR2Q8N2R0 312 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 TMEM45BQ96B21 275 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 LINC00470Q9BZP3 86 aa13.19□□□□□ -0.3
RTN3-205ENST00000356000 NXF5Q9H1B4 397 aaKnown RBP13.19□□□□□ -0.3
RTN3-205ENST00000356000 TECRQ9NZ01 308 aaKnown RBP13.19□□□□□ -0.3
RTN3-205ENST00000356000 ANKRD30BLA7E2S9 258 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 RHBDL1O75783 438 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1-39P01597 117 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 IGKV1D-39P04432 117 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 CDAP32320 146 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 BLNKQ8WV28 456 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 STARD5Q9NSY2 213 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 KIAA1549Q9HCM3 1950 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 OR11H12B2RN74 326 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 KLRC4-KLRK1H3BQV0 150 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 FOXI2Q6ZQN5 318 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 C1orf210Q8IVY1 113 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 OR11H1Q8NG94 326 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 OR11H2Q8NH07 326 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
RTN3-205ENST00000356000 ZNF442Q9H7R0 627 aa13.18□□□□□ -0.3
RTN3-205ENST00000356000 PHPT1Q9NRX4 125 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms