RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TEX45Q8NA69 505 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 ADAD2Q8NCV1 583 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 BEST4Q8NFU0 473 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 SLA2Q9H6Q3 261 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 CCL28Q9NRJ3 127 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 ETV7Q9Y603 341 aa12.82□□□□□ -0.36
PDLIM7-201ENST00000355572 RRASP10301 218 aa12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 PITPNAQ00169 270 aa12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 HOGA1Q86XE5 327 aa12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 ADTRPQ96IZ2 230 aa12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 TINAGL1Q9GZM7 467 aaPredicted RBP12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 TAS2R8Q9NYW2 309 aa12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 HUWE1Q7Z6Z7 4374 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-201ENST00000355572 HMX3A6NHT5 357 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 TNFSF12O43508 249 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 LY86O95711 162 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 CDK10Q15131 360 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 IL34Q6ZMJ4 242 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 OSR1Q8TAX0 266 aaPredicted RBP12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 ACOT12Q8WYK0 555 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 COA4Q9NYJ1 87 aa12.8□□□□□ -0.36
PDLIM7-201ENST00000355572 CGB1A6NKQ9 187 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 TEX22C9J3V5 150 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 H3BUA1 57 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 CTXN2P0C2S0 81 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 FCGR2CP31995 323 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 INSL3P51460 131 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 SCAND1P57086 179 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 VMA21Q3ZAQ7 101 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 ZNF429Q86V71 674 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 PUSL1Q8N0Z8 303 aaKnown RBP12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 MFSD4AQ8N468 514 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 SECTM1Q8WVN6 248 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 TCTEX1D2Q8WW35 142 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 VCX3AQ9NNX9 186 aa12.79□□□□□ -0.36
PDLIM7-201ENST00000355572 AIREO43918 545 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 SCGNO76038 276 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 IL6RP08887 468 aaPredicted RBP12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 EDN2P20800 178 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 ALDH3B2P48448 385 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 NCS1P62166 190 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 CBX3Q13185 183 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 ZNF343Q6P1L6 599 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 OR13F1Q8NGS4 319 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 PHB2Q99623 299 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 DCUN1D5Q9BTE7 237 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 AKIP1Q9NQ31 210 aa12.78□□□□□ -0.36
PDLIM7-201ENST00000355572 TRBV9A0A0B4J1U6 114 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 C13orf42A0A1B0GVH6 325 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 BRI3O95415 125 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 PPYP01298 95 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 EIF4EP06730 217 aaKnown RBP12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 OR9G9P0C7N8 305 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 GP9P14770 177 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 KLF5Q13887 457 aaPredicted RBP12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 SSX9Q7RTT3 188 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 ANAPC10Q9UM13 185 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 DMRT1Q9Y5R6 373 aa12.77□□□□□ -0.37
PDLIM7-201ENST00000355572 KMT2CQ8NEZ4 4911 aaKnown RBP12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 A0A0A6YYH2 397 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 TRAV3A0A0B4J244 114 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 A6NJ64 397 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 KBTBD11O94819 623 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 IGLV1-51P01701 117 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 FXYD4P59646 89 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 ARPC4P59998 168 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 ZNF818PQ6ZRF7 136 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 SBSPONQ8IVN8 264 aa12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 HSD17B10Q99714 261 aaKnown RBP12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 RANGRFQ9HD47 186 aaPredicted RBP12.76□□□□□ -0.37
PDLIM7-201ENST00000355572 BMPR1BO00238 502 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 XRCC3O43542 346 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 SYNJ2BPP57105 145 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 TAS2R20P59543 309 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 RHOGP84095 191 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 ADAMTSL5Q6ZMM2 481 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 Q8N1Y9 231 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 SAMD12Q8N8I0 201 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 TMEM167AQ8TBQ9 72 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 FUNDC2Q9BWH2 189 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 SLC5A7Q9GZV3 580 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 DIABLOQ9NR28 239 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 ZMAT5Q9UDW3 170 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 PRELID3BQ9Y3B1 194 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 S4R3C0 116 aa12.75□□□□□ -0.37
PDLIM7-201ENST00000355572 IZUMO1RA6ND01 250 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 ZNF701M0R085 212 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 SULT1C2O00338 296 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 OR2J3O76001 311 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 AREGP15514 252 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 CD40LGP29965 261 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 RFX2P48378 723 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 VBP1P61758 197 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 UBE2NLQ5JXB2 153 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 ZNF66Q6ZN08 573 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 TMEM17Q86X19 198 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 MMD2Q8IY49 270 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms