RNA–Protein interactions for RNA: ENST00000355556.6

HTR3A-202, Transcript of 5-hydroxytryptamine receptor 3A, humanhuman

TSL 2 BASIC

Gene HTR3A, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3A-202ENST00000355556 FGF8P55075 233 aaPredicted RBP12.54□□□□□ -0.4
HTR3A-202ENST00000355556 RPS16P62249 146 aaKnown RBP12.54□□□□□ -0.4
HTR3A-202ENST00000355556 HNF4GQ14541 408 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 CT45A1Q5HYN5 189 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 ZNF787Q6DD87 383 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 RPP25LQ8N5L8 163 aaKnown RBP12.54□□□□□ -0.4
HTR3A-202ENST00000355556 CT45A3Q8NHU0 189 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 PINX1Q96BK5 328 aaKnown RBP12.54□□□□□ -0.4
HTR3A-202ENST00000355556 ZNF665Q9H7R5 613 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 DCAF16Q9NXF7 216 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 SH3BGRL2Q9UJC5 107 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 TIMM9Q9Y5J7 89 aa12.54□□□□□ -0.4
HTR3A-202ENST00000355556 RBFOX2O43251 390 aaKnown RBP eCLIP12.53□□□□□ -0.4
HTR3A-202ENST00000355556 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
HTR3A-202ENST00000355556 THBDP07204 575 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TNFSF4P23510 183 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
HTR3A-202ENST00000355556 FOXC1Q12948 553 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ELOBQ15370 118 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 GFRALQ6UXV0 394 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ZNF788Q6ZQV5 615 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 SSX9Q7RTT3 188 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TCF23Q7RTU1 214 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 WFDC8Q8IUA0 241 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 VKORC1L1Q8N0U8 176 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 DDB2Q92466 427 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 CCL13Q99616 98 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ZNF251Q9BRH9 671 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TMEM147Q9BVK8 224 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 GFOD1Q9NXC2 390 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 JKAMPQ9P055 326 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 GAB2Q9UQC2 676 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TET2Q6N021 2002 aaPredicted RBP12.53□□□□□ -0.4
HTR3A-202ENST00000355556 IFITM10A6NMD0 228 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 ITGB1BP1O14713 200 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 GYPAP02724 150 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 GNB2P62879 340 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 CCL8P80075 99 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TBR1Q16650 682 aa12.53□□□□□ -0.4
HTR3A-202ENST00000355556 TGIF2-C20orf24A0A0A6YYL0 155 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 ZFP92A6NM28 416 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 FAM90A9PA6NNJ1 464 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 ADIPOQQ15848 244 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 ACSM6Q6P461 480 aa12.52□□□□□ -0.41
HTR3A-202ENST00000355556 SNRNP40Q96DI7 357 aaKnown RBP12.52□□□□□ -0.41
HTR3A-202ENST00000355556 YLPM1P49750 1951 aaKnown RBP12.52□□□□□ -0.41
HTR3A-202ENST00000355556 TRGV10A0A0A0MS01 117 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 C15orf62A8K5M9 175 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 IFNA17P01571 189 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 RAB7AP51149 207 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 KIAA0141Q14154 515 aaPredicted RBP12.51□□□□□ -0.41
HTR3A-202ENST00000355556 TEX36Q5VZQ5 186 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 C1QL4Q86Z23 238 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 ZCCHC24Q8N2G6 241 aaKnown RBP12.51□□□□□ -0.41
HTR3A-202ENST00000355556 FAM216BQ8N7L0 139 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 S1PR3Q99500 378 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 SCNM1Q9BWG6 230 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
HTR3A-202ENST00000355556 MIOXQ9UGB7 285 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 OR4A8P0C604 315 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 BCL2P10415 239 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 MDKP21741 143 aaPredicted RBP12.51□□□□□ -0.41
HTR3A-202ENST00000355556 BSPH1Q075Z2 132 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 PRAMEF5Q5TYX0 476 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
HTR3A-202ENST00000355556 SAA2-SAA4A0A096LPE2 208 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 TRAV3A0A0B4J244 114 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 SAA2P0DJI9 122 aaPredicted RBP12.5□□□□□ -0.41
HTR3A-202ENST00000355556 FGF7P21781 194 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 RELBQ01201 579 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 TFF3Q07654 80 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 PRR30Q53SZ7 412 aaPredicted RBP12.5□□□□□ -0.41
HTR3A-202ENST00000355556 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 TVP23CQ96ET8 276 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 RAB9BQ9NP90 201 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 ROS1P08922 2347 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 C17orf100A8MU93 164 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 MMP23AO75900 390 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 SPCS3P61009 180 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 OR4A16Q8NH70 328 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 NPCDR1Q9BY65 106 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 LINC00574Q9H8X3 128 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 SLC39A9Q9NUM3 307 aa12.5□□□□□ -0.41
HTR3A-202ENST00000355556 K7ENP7 123 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 IRF2P14316 349 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 NDUFA6P56556 154 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 RAB11AP62491 216 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 ZNF674Q2M3X9 581 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 PDLIM3Q53GG5 364 aaPredicted RBP12.49□□□□□ -0.41
HTR3A-202ENST00000355556 FAM90A2PQ658T7 463 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 CDPF1Q6NVV7 123 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 CORO2AQ92828 525 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 NIPSNAP3BQ9BS92 247 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 TRBV23-1A0A0A0MS06 115 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 KIR2DS2P43631 304 aa12.49□□□□□ -0.41
HTR3A-202ENST00000355556 ERVK-16P61578 105 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms