RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 GAMTQ14353 236 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 RCC1LQ96I51 464 aaKnown RBP10.46□□□□□ -0.74
COLCA1-201ENST00000355430 PARLQ9H300 379 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 PXMP4Q9Y6I8 212 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 CCL20P78556 96 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 FAM162BQ5T6X4 162 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 ST6GALNAC3Q8NDV1 305 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 CACNA1GO43497 2377 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 BRWD1Q9NSI6 2320 aa10.46□□□□□ -0.74
COLCA1-201ENST00000355430 UBE2CO00762 179 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 S1PR2O95136 353 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 PLA2G2CQ5R387 149 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 PKIBQ9C010 78 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 TIMM9Q9Y5J7 89 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 HELTA6NFD8 242 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 MGST3O14880 152 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 HOXA5P20719 270 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 TEPPQ6URK8 271 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 SSC4DQ8WTU2 575 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 WDYHV1Q96HA8 205 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 WDR61Q9GZS3 305 aaKnown RBP10.45□□□□□ -0.74
COLCA1-201ENST00000355430 CNOT1A5YKK6 2376 aaKnown RBP10.45□□□□□ -0.74
COLCA1-201ENST00000355430 GCGP01275 180 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 UCP1P25874 307 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 NPY1RP25929 384 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 ICAM4Q14773 271 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 OR5P3Q8WZ94 311 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 NAGKQ9UJ70 344 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 DBX1A6NMT0 343 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 GLRXP35754 106 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 Q6ZN92 141 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 DRAM1Q8N682 238 aa10.45□□□□□ -0.74
COLCA1-201ENST00000355430 TCTEX1D1Q8N7M0 179 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 PLSCR2Q9NRY7 297 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 KLF7O75840 302 aaPredicted RBP10.44□□□□□ -0.74
COLCA1-201ENST00000355430 KBTBD11O94819 623 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 BSPH1Q075Z2 132 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 IGKV1D-13A0A0B4J2D9 117 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 C1QTNF9BB2RNN3 333 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 RPLP1P05386 114 aaKnown RBP10.44□□□□□ -0.74
COLCA1-201ENST00000355430 C1QTNF9P0C862 333 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 IGKV1-13P0DP09 117 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 PSMG3Q9BT73 122 aaPredicted RBP10.44□□□□□ -0.74
COLCA1-201ENST00000355430 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 PROB1E7EW31 1015 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 K7N7A8 449 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 HPRT1P00492 218 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 MMDQ15546 238 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 KLF14Q8TD94 323 aaPredicted RBP10.44□□□□□ -0.74
COLCA1-201ENST00000355430 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 A0A087WWC5 75 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 FOLR2P14207 255 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 PAX5Q02548 391 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 MIC13Q5XKP0 118 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 ZNF788Q6ZQV5 615 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 FLYWCH2Q96CP2 140 aaKnown RBP10.44□□□□□ -0.74
COLCA1-201ENST00000355430 TMEM208Q9BTX3 173 aa10.44□□□□□ -0.74
COLCA1-201ENST00000355430 PPIAL4CA0A0B4J2A2 164 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 PPIAL4GP0DN37 164 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 EGR1P18146 543 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 DSCR9P59020 149 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 SVILO95425 2214 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 M0R2Z0 102 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 ORM2P19652 201 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 C5orf52A6NGY3 159 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 RAB29O14966 203 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 RHBDL1O75783 438 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 WISP1O95388 367 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 TMEM183AQ8IXX5 376 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 C9orf106Q8NAJ2 232 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 ZNF524Q96C55 264 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 OR4D5Q8NGN0 318 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 FAM131CQ96AQ9 280 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 HSPB9Q9BQS6 159 aa10.43□□□□□ -0.74
COLCA1-201ENST00000355430 PNRC2Q9NPJ4 139 aaKnown RBP10.43□□□□□ -0.74
COLCA1-201ENST00000355430 IGLV3-32A0A0A0MS00 114 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 CFPP27918 469 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 PAFAH1B2P68402 229 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 LRRC75BQ2VPJ9 315 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 FAM216AQ8WUB2 273 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 EP400Q96L91 3159 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 M0QZK8 103 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 GGCTO75223 188 aaKnown RBP10.42□□□□□ -0.74
COLCA1-201ENST00000355430 LIPFP07098 398 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 AGAP20933 346 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 REC114Q7Z4M0 266 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 OR1L4Q8NGR5 311 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 C1QTNF5Q9BXJ0 243 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 SRD5A3Q9H8P0 318 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 CBLN4Q9NTU7 201 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 OR51B2Q9Y5P1 312 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 RFNGQ9Y644 331 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 IL18BPO95998 194 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 ARL14EPLP0DKL9 152 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 ECSCRQ19T08 205 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 OR1B1Q8NGR6 318 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 RIF1Q5UIP0 2472 aaKnown RBP10.42□□□□□ -0.74
COLCA1-201ENST00000355430 IGKV1-12A0A0C4DH73 117 aa10.42□□□□□ -0.74
COLCA1-201ENST00000355430 TGFAP01135 160 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms