RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 OR1P1Q8NH06 330 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM206AQ9NX38 181 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 ROS1P08922 2347 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 C4AP0C0L4 1744 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 CD69Q07108 199 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 SPSB4Q96A44 273 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3-48P01763 117 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 HOXA5P20719 270 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 EFNB2P52799 333 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TUBD1Q9UJT1 453 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3-23P01764 117 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 KIAA1644Q3SXP7 199 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 POLR2AP24928 1970 aaKnown RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 HBBP68871 147 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR11H12B2RN74 326 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 C9orf40Q8IXQ3 194 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR11H1Q8NG94 326 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR5A1Q8NGJ0 315 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR11H2Q8NH07 326 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TRBV9A0A0B4J1U6 114 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 A0A1B0GV72 72 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 DXOO77932 396 aaKnown RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 OR5AC2Q9NZP5 309 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 LCN2P80188 198 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 UNC119Q13432 240 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 VAX1Q5SQQ9 334 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 PEAR1Q5VY43 1037 aaPredicted RBP4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 TCF23Q7RTU1 214 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 SCGB3A1Q96QR1 104 aa4.98□□□□□ -1.61
SRGAP1-201ENST00000355086 IGKV3D-20A0A0C4DH25 116 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 BGLAPP02818 100 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 OR4D11Q8NGI4 311 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 NPIPB4C9JG80 1138 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TIAM2Q8IVF5 1701 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 CRYBB3P26998 211 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TSPAN7P41732 249 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM74BQ9NUR3 256 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 ANKRD31Q8N7Z5 1873 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF826PQ6ZT77 177 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 KCNK17Q96T54 332 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 A0A0G2JLM5 398 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 NDUFA3O95167 84 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 VSIG10L2P0DP72 767 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 PEX11BO96011 259 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 F12P00748 615 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 C19orf48Q6RUI8 117 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 C18orf15Q96N68 181 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 KDM3BQ7LBC6 1761 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 ATP5LO75964 103 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 FAM209AQ5JX71 171 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 STHQ8IWL8 128 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 KCNK7Q9Y2U2 307 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 ACSF3Q4G176 576 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 WNT2BQ93097 391 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 A0A1W2PRX2 142 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 PRR32B1ATL7 298 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 AGAP20933 346 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 ZNF345Q14585 488 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 SYNGR3O43761 229 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 LEMD1Q68G75 181 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 C1orf162Q8NEQ5 155 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 RARRES2Q99969 163 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 AKAP11Q9UKA4 1901 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TRGV2A0A075B6R0 118 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 PATE3B3GLJ2 98 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 HSPE1P61604 102 aaKnown RBP4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 LINC00305Q7Z4B0 112 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM252Q8N6L7 170 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 SDF2L1Q9HCN8 221 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM106BQ9NUM4 274 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 LILRA6Q6PI73 481 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 SEMA5BQ9P283 1151 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 PGLYRP1O75594 196 aaPredicted RBP4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 KLK2P20151 261 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 VKORC1L1Q8N0U8 176 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 NEUROG1Q92886 237 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 PRR19A6NJB7 356 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 LNP1A1A4G5 178 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 NKX2-8O15522 239 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 C19orf24Q9BVV8 132 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 CLEC7AQ9BXN2 247 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 TNFRSF9Q07011 255 aa4.97□□□□□ -1.61
SRGAP1-201ENST00000355086 OR2K2Q8NGT1 345 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 IGHV3-49A0A0A0MS15 119 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 H3BTX0 84 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 ITGBL1O95965 494 aaPredicted RBP4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 FTH1P19P0C7X4 201 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 RPS11P62280 158 aaKnown RBP eCLIP4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 DDA1Q9BW61 102 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 TRAV12-3A0A0B4J271 114 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 APOMO95445 188 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 SAPCD1Q5SSQ6 148 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 LDLRAD4O15165 306 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 RNASE4P34096 147 aaKnown RBP4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 OR4X2Q8NGF9 303 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 TMEM186Q96B77 213 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 PKDREJQ9NTG1 2253 aa4.96□□□□□ -1.61
SRGAP1-201ENST00000355086 CHD3Q12873 2000 aaKnown RBP4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 A0A1B0GWB2 263 aa4.96□□□□□ -1.62
SRGAP1-201ENST00000355086 ASIPP42127 132 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms