RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 FAM90A12PA8MX19 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A5PA8MXJ8 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 K7N7A8 449 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A15PP0C7V4 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A13PP0C7W8 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A14PP0C7W9 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM90A24PP0C7X0 464 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 HTR1DP28221 377 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 MFAP2P55001 183 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 UCP3P55916 312 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 ASCL3Q9NQ33 180 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 B4DEV8 164 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 UCP1P25874 307 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 HNRNPA3P51991 378 aaKnown RBP10.35□□□□□ -0.75
TRPM3-201ENST00000354500 FAM166AQ6J272 317 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 OR4F17Q8NGA8 305 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 VSTM2AQ8TAG5 236 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 C1QTNF5Q9BXJ0 243 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 QTRT1Q9BXR0 403 aaKnown RBP10.35□□□□□ -0.75
TRPM3-201ENST00000354500 PARLQ9H300 379 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 TCF19Q9Y242 345 aa10.35□□□□□ -0.75
TRPM3-201ENST00000354500 CCDC168Q8NDH2 2452 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 GRIFINA4D1Z8 144 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 RRHO14718 337 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 NEURL1O76050 574 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 OR4A8P0C604 315 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 PRB4P10163 310 aaPredicted RBP10.34□□□□□ -0.75
TRPM3-201ENST00000354500 USF1P22415 310 aaPredicted RBP10.34□□□□□ -0.75
TRPM3-201ENST00000354500 PTGDSP41222 190 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 PRRX1P54821 245 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 HIST3H3Q16695 136 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 ABLIM2Q6H8Q1 611 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 FAM89BQ8N5H3 189 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 ABHD17AQ96GS6 310 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 WASHC3Q9Y3C0 194 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 AHRRA9YTQ3 701 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 PTBP3O95758 552 aaKnown RBP10.34□□□□□ -0.75
TRPM3-201ENST00000354500 COL8A1P27658 744 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 LHX2P50458 406 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 AAMDCQ9H7C9 122 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 LOC102723996A0A087X1L8 192 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 CXorf1O96002 111 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 LINC00869P0C866 280 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 ARL14EPLP0DKL9 152 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 GATA2P23769 480 aaPredicted RBP10.34□□□□□ -0.75
TRPM3-201ENST00000354500 KIR2DS2P43631 304 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 CLDN18P56856 261 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 SPCS3P61009 180 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 OR8I2Q8N0Y5 310 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 PITPNC1Q9UKF7 332 aa10.34□□□□□ -0.75
TRPM3-201ENST00000354500 GNG7O60262 68 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 SMPD2O60906 423 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 HLA-DRB5Q30154 266 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 C10orf113Q5VZT2 155 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 Q6ZT83 130 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 FAM216BQ8N7L0 139 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 PRSS3P2Q8NHM4 247 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 NABP1Q96AH0 204 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 LDLRAD4O15165 306 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 ACAA1P09110 424 aaPredicted RBP10.33□□□□□ -0.76
TRPM3-201ENST00000354500 IGHV1-2P23083 117 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 TFF3Q07654 80 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 PEAR1Q5VY43 1037 aaPredicted RBP10.33□□□□□ -0.76
TRPM3-201ENST00000354500 GLRX5Q86SX6 157 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 NDFIP1Q9BT67 221 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 NAGKQ9UJ70 344 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 LILRA1O75019 489 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 S100A4P26447 101 aaKnown RBP10.33□□□□□ -0.76
TRPM3-201ENST00000354500 CRYBB3P26998 211 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 KRTCAP3Q53RY4 240 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 ANAPC16Q96DE5 110 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 IGF2RP11717 2491 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 COX5BP10606 129 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 RND2P52198 227 aa10.33□□□□□ -0.76
TRPM3-201ENST00000354500 CISD1Q9NZ45 108 aaKnown RBP10.33□□□□□ -0.76
TRPM3-201ENST00000354500 CEACAM18A8MTB9 384 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 TNFSF10P50591 281 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 ZFP36L1Q07352 338 aaKnown RBP10.32□□□□□ -0.76
TRPM3-201ENST00000354500 PQLC2Q6ZP29 291 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 OR5AU1Q8NGC0 362 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 LINC01560Q8TB33 94 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 ZNF714Q96N38 554 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 E9PQ18 207 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 PDE6DO43924 150 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 RAMP3O60896 148 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 LINC00205P59089 165 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 FAM131CQ96AQ9 280 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 SSBP3Q9BWW4 388 aaPredicted RBP10.32□□□□□ -0.76
TRPM3-201ENST00000354500 WDR61Q9GZS3 305 aaKnown RBP10.32□□□□□ -0.76
TRPM3-201ENST00000354500 MED13Q9UHV7 2174 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 TRAV24A0A0B4J272 114 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 UCNP55089 124 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 C9orf106Q8NAJ2 232 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 SMIM8Q96KF7 97 aa10.32□□□□□ -0.76
TRPM3-201ENST00000354500 TBX15Q96SF7 602 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms