RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MFAP4P55083 255 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 H2BFSP57053 126 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 DEFA6Q01524 100 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 RBPMS2Q6ZRY4 209 aaKnown RBP12.57□□□□□ -0.4
COL17A1-201ENST00000353479 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 GNLYP22749 145 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 WDR82Q6UXN9 313 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 FAM90A1Q86YD7 464 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 PLPPR1Q8TBJ4 325 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 IGHV3-48P01763 117 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 SELENOTP62341 195 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 NABP1Q96AH0 204 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 J3QRE1 110 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 ZNF137PP52743 207 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
COL17A1-201ENST00000353479 DPPA3Q6W0C5 159 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 LDLRAD3Q86YD5 345 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 OR4C12Q96R67 309 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 PTBP3O95758 552 aaKnown RBP12.57□□□□□ -0.4
COL17A1-201ENST00000353479 CCL1P22362 96 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 PRB3Q04118 309 aaPredicted RBP12.57□□□□□ -0.4
COL17A1-201ENST00000353479 NIT2Q9NQR4 276 aa12.57□□□□□ -0.4
COL17A1-201ENST00000353479 TGFAP01135 160 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 CRYGSP22914 178 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 HIST1H3AP68431 136 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 GUCA2BQ16661 112 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 PLA2G2CQ5R387 149 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 TAF15Q92804 592 aaKnown RBP eCLIP12.56□□□□□ -0.4
COL17A1-201ENST00000353479 C7orf69Q9H7B7 122 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 COL6A6A6NMZ7 2263 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 NOTCH4Q99466 2003 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 C1QL1O75973 258 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 CCL3L1P16619 93 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 PRNTQ86SH4 94 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 NR2C2APQ86WQ0 139 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 WFIKKN1Q96NZ8 548 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 NPIPB11E5RHQ5 1161 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 DLK1P80370 383 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 PEAR1Q5VY43 1037 aaPredicted RBP12.56□□□□□ -0.4
COL17A1-201ENST00000353479 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 FCER1GP30273 86 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 ATP5G2Q06055 141 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 MEF2CQ06413 473 aaPredicted RBP12.56□□□□□ -0.4
COL17A1-201ENST00000353479 LRP11Q86VZ4 500 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 PRSS3P2Q8NHM4 247 aa12.56□□□□□ -0.4
COL17A1-201ENST00000353479 Q6ZS92 163 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 CENPVQ7Z7K6 275 aaPredicted RBP12.55□□□□□ -0.4
COL17A1-201ENST00000353479 LINC00312Q9Y6C7 94 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 ANAPC1Q9H1A4 1944 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 BMPR1BO00238 502 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 FCGR2BP31994 310 aaPredicted RBP12.55□□□□□ -0.4
COL17A1-201ENST00000353479 H1FOOQ8IZA3 346 aaPredicted RBP12.55□□□□□ -0.4
COL17A1-201ENST00000353479 PAQR4Q8N4S7 273 aaPredicted RBP12.55□□□□□ -0.4
COL17A1-201ENST00000353479 OR5AU1Q8NGC0 362 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 IL18BPO95998 194 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 IGKV1D-33P01593 117 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 IGKV1-33P01594 117 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 ZNF146Q15072 292 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 C16orf92Q96LL3 132 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 SDHCQ99643 169 aaPredicted RBP12.55□□□□□ -0.4
COL17A1-201ENST00000353479 A0A0G2JNJ9 132 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 B3GALT5-AS1P59052 145 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 KIF26BQ2KJY2 2108 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 FBXL15Q9H469 300 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 Q9UFV3 132 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 TUBD1Q9UJT1 453 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 THBDP07204 575 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
COL17A1-201ENST00000353479 SLC16A13Q7RTY0 426 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 A0A1W2PS18 150 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 C17orf98A8MV24 154 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 COMPP49747 757 aaPredicted RBP12.54□□□□□ -0.4
COL17A1-201ENST00000353479 ANAPC16Q96DE5 110 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 IGHV3-35A0A0C4DH35 117 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 H3BQ15 152 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 IGHV1-46P01743 117 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 C11orf42Q8N5U0 333 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 ISOC2Q96AB3 205 aa12.54□□□□□ -0.4
COL17A1-201ENST00000353479 CACNA1HO95180 2353 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 SULT1A2P50226 295 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 LRRC75BQ2VPJ9 315 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 MRPL20Q9BYC9 149 aaKnown RBP12.53□□□□□ -0.4
COL17A1-201ENST00000353479 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 BCL2P10415 239 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 EFNB1P98172 346 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 RNFT1Q5M7Z0 435 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
COL17A1-201ENST00000353479 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 CGB1A6NKQ9 187 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 FAM106AQ4KMX7 169 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 ZNF880Q6PDB4 577 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 EIF3GO75821 320 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL17A1-201ENST00000353479 FAM74A3Q4VXF1 159 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 RTN4RL2Q86UN3 420 aa12.53□□□□□ -0.4
COL17A1-201ENST00000353479 OSR1Q8TAX0 266 aaPredicted RBP12.53□□□□□ -0.4
COL17A1-201ENST00000353479 CSN3P07498 182 aa12.52□□□□□ -0.4
COL17A1-201ENST00000353479 NPIPB3Q92617 1050 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms