RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ABHD12Q8N2K0 398 aa15.03■□□□□ -0
PTP4A3-202ENST00000349124 NEIL1Q96FI4 390 aaPredicted RBP15.03■□□□□ -0
PTP4A3-202ENST00000349124 MGAQ8IWI9 3026 aa15.03■□□□□ -0
PTP4A3-202ENST00000349124 NDUFB4O95168 129 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 MBP02144 154 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 CD82P27701 267 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 CD1BP29016 333 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 GNB2P62879 340 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 OR1P1Q8NH06 330 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 CNOT1A5YKK6 2376 aaKnown RBP15.02■□□□□ -0
PTP4A3-202ENST00000349124 DMXL1Q9Y485 3027 aa15.02■□□□□ -0
PTP4A3-202ENST00000349124 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 IFNA10P01566 189 aa15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 PRDX2P32119 198 aa15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 VWC2Q2TAL6 325 aa15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 TMEM178AQ8NBL3 297 aa15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 FDCSPQ8NFU4 85 aa15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 INTS1Q8N201 2190 aaKnown RBP15.02□□□□□ -0.01
PTP4A3-202ENST00000349124 GATCO43716 136 aaKnown RBP15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 HRASP01112 189 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 GZMBP10144 247 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 DUTP33316 252 aaKnown RBP15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNRF1Q8ND25 227 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 OR2Z1Q8NG97 314 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 GNG12Q9UBI6 72 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 DUSP13Q9UII6 198 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 CACNA1HO95180 2353 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A1B0GUS0 222 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 C1QTNF9P0C862 333 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 HNF1AP20823 631 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 GPR12P47775 334 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 NUBP1P53384 320 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 CIB3Q96Q77 187 aaPredicted RBP15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 TAAR6Q96RI8 345 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 MANBALQ9NQG1 85 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 WASF3Q9UPY6 502 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 M0R1X1 148 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 TGOLN2O43493 480 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 FAM201AQ5SY85 155 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 OR2T10Q8NGZ9 312 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 LURAP1Q96LR2 239 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 WDR83OSQ9Y284 106 aa15.01□□□□□ -0.01
PTP4A3-202ENST00000349124 IGKV1D-17A0A075B6S4 117 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 FAM78BQ5VT40 261 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 PRR7Q8TB68 274 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 HSD17B10Q99714 261 aaKnown RBP15□□□□□ -0.01
PTP4A3-202ENST00000349124 OPN3Q9H1Y3 402 aaPredicted RBP15□□□□□ -0.01
PTP4A3-202ENST00000349124 SPINT2O43291 252 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 SELLP14151 372 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 HOXC12P31275 282 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 ACOT6Q3I5F7 207 aaPredicted RBP15□□□□□ -0.01
PTP4A3-202ENST00000349124 PRAMEF5Q5TYX0 476 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 MIC13Q5XKP0 118 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 LINC01551Q86U37 167 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 TMEM170AQ8WVE7 144 aa15□□□□□ -0.01
PTP4A3-202ENST00000349124 AQP7O14520 342 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 SLC31A2O15432 143 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 SMIM21Q3B7S5 101 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 HEYLQ9NQ87 328 aaPredicted RBP14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 CACNA1GO43497 2377 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 DDTP30046 118 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 GUSBP1Q15486 140 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 MORN2Q502X0 79 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 PLA2G2CQ5R387 149 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 TREML4Q6UXN2 200 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 SSMEM1Q8WWF3 244 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 MS4A5Q9H3V2 200 aa14.99□□□□□ -0.01
PTP4A3-202ENST00000349124 CEP250Q9BV73 2442 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 TRBV20OR9-2A0A075B6H5 130 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A087X0M5 115 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A1B0GX30 115 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A1W2PPV4 95 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNF705GA8MUZ8 300 aaPredicted RBP14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 RBFOX2O43251 390 aaKnown RBP eCLIP14.98□□□□□ -0.011e-6■■■□□ 15
PTP4A3-202ENST00000349124 MYOD1P15172 320 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 WT1P19544 449 aaPredicted RBP14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 GCH1P30793 250 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 HCFC1P51610 2035 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 IGHV2OR16-5A0A0B4J2B6 119 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 IGHV1-18A0A0C4DH31 117 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 C17orf112F2Z3M2 114 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 JOSD1Q15040 202 aaPredicted RBP14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNF718Q3SXZ3 478 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNF600Q6ZNG1 722 aa14.98□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A1B0GV90 55 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 ARL14EPLP0DKL9 152 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 TGIF2LYQ8IUE0 185 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNF664Q8N3J9 261 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 OR4A16Q8NH70 328 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 C1orf159Q96HA4 380 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 MGST2Q99735 147 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 ROS1P08922 2347 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 GGCTO75223 188 aaKnown RBP14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 KITLGP21583 273 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 IL3RAP26951 378 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 PKIAP61925 76 aa14.97□□□□□ -0.01
PTP4A3-202ENST00000349124 TTC28Q96AY4 2481 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 A0A0U1RQK1 487 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 ANAPC16Q96DE5 110 aa14.96□□□□□ -0.01
PTP4A3-202ENST00000349124 ZNF320A2RRD8 509 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms