RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 ZNF146Q15072 292 aa13.14□□□□□ -0.31
PTPRO-202ENST00000348962 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 KLF7O75840 302 aaPredicted RBP13.13□□□□□ -0.31
PTPRO-202ENST00000348962 LHX2P50458 406 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 CD200R1LQ6Q8B3 271 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 MIEN1Q9BRT3 115 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 SMDT1Q9H4I9 107 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 PIN1P1O15428 100 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 FAM90A1Q86YD7 464 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 FAM216BQ8N7L0 139 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 POC1AQ8NBT0 407 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 ABCA4P78363 2273 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 TWIST1Q15672 202 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 MIC13Q5XKP0 118 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 ZNF880Q6PDB4 577 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 DRAM1Q8N682 238 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 TAF15Q92804 592 aaKnown RBP eCLIP13.13□□□□□ -0.31
PTPRO-202ENST00000348962 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 SNURFLB1AK76 121 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 BCL2P10415 239 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 P2RY4P51582 365 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 MFAP2P55001 183 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 UCP3P55916 312 aa13.13□□□□□ -0.31
PTPRO-202ENST00000348962 CSRP3P50461 194 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 C19orf24Q9BVV8 132 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 C1QTNF5Q9BXJ0 243 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 NPFFR1Q9GZQ6 430 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 DCAF16Q9NXF7 216 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 PHLDA3Q9Y5J5 127 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 IGKV3D-15A0A087WSY6 115 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 IGKV3-15P01624 115 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 RNF224P0DH78 156 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
PTPRO-202ENST00000348962 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 REG1AP05451 166 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 GPX1P07203 203 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 IER3P46695 156 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 IL36RNQ9UBH0 155 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 ELOA3CA0A087WX78 387 aaPredicted RBP13.12□□□□□ -0.31
PTPRO-202ENST00000348962 GCSHP23434 173 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 WDFY1Q8IWB7 410 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 STPG2Q8N412 459 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 SLC25A38Q96DW6 304 aa13.12□□□□□ -0.31
PTPRO-202ENST00000348962 H3BQ15 152 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 APCSP02743 223 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 ZIC4Q8N9L1 334 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.11□□□□□ -0.31
PTPRO-202ENST00000348962 GALNT14Q96FL9 552 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 REPIN1Q9BWE0 567 aaKnown RBP13.11□□□□□ -0.31
PTPRO-202ENST00000348962 HSPB8Q9UJY1 196 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 ZG16O60844 167 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 UNQ6494/PRO21346Q6UXR6 183 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 RPS20P60866 119 aaKnown RBP13.11□□□□□ -0.31
PTPRO-202ENST00000348962 NPIPB3Q92617 1050 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 VSIG10L2P0DP72 767 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 HKR1P10072 659 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 TBR1Q16650 682 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 FAM201AQ5SY85 155 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 ABLIM2Q6H8Q1 611 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 DHRS11Q6UWP2 260 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 METRNQ9UJH8 293 aa13.11□□□□□ -0.31
PTPRO-202ENST00000348962 C12orf77C9JDV5 145 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 IGHV3-35A0A0C4DH35 117 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 KBTBD11-OT1A0A1B0GTJ5 212 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 C7orf77A4D0Y5 90 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 IQCF6A8MYZ5 107 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 IL4P05112 153 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 SRSF9Q13242 221 aaKnown RBP eCLIP13.1□□□□□ -0.31
PTPRO-202ENST00000348962 FAM53AQ6NSI3 398 aaPredicted RBP13.1□□□□□ -0.31
PTPRO-202ENST00000348962 AURKAIP1Q9NWT8 199 aaPredicted RBP13.1□□□□□ -0.31
PTPRO-202ENST00000348962 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 PSMB2P49721 201 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 FBXL15Q9H469 300 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 LINC00312Q9Y6C7 94 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
PTPRO-202ENST00000348962 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 RTN4RQ9BZR6 473 aa13.1□□□□□ -0.31
PTPRO-202ENST00000348962 CX3CL1P78423 397 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 OR51M1Q9H341 326 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 GATAD1Q8WUU5 269 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 GPHA2Q96T91 129 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 SEMA5BQ9P283 1151 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 ZNF818PQ6ZRF7 136 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 VKORC1L1Q8N0U8 176 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 SGMS2Q8NHU3 365 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 A0A0B4J293 547 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 M0QZK8 103 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 OR5AC2Q9NZP5 309 aa13.09□□□□□ -0.31
PTPRO-202ENST00000348962 NDUFB4O95168 129 aa13.08□□□□□ -0.31
PTPRO-202ENST00000348962 DLX6P56179 175 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 RPL39P5Q59GN2 51 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 PPP1R27Q86WC6 154 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 C12orf57Q99622 126 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 M0R3E3 92 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 THBDP07204 575 aa13.08□□□□□ -0.32
PTPRO-202ENST00000348962 MEF2BQ02080 365 aaPredicted RBP13.08□□□□□ -0.32
PTPRO-202ENST00000348962 IBA57Q5T440 356 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms