RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 LYG1Q8N1E2 194 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 OR10A7Q8NGE5 316 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 OR52E5Q8NH55 327 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 NDRG3Q9UGV2 375 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 TIMM9Q9Y5J7 89 aa16.75■□□□□ 0.27
CHRNA3-202ENST00000348639 IFNA17P01571 189 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 CD3EP07766 207 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 APOBEC3AP31941 199 aaPredicted RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 SPCS3P61009 180 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 GNB2P62879 340 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 PDLIM3Q53GG5 364 aaPredicted RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 SPINK9Q5DT21 86 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 SLC25A48Q6ZT89 311 aaKnown RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 CENPVQ7Z7K6 275 aaPredicted RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 TNFRSF13BO14836 293 aaPredicted RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 RPL31P62899 125 aaKnown RBP16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 RELBQ01201 579 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 EFNB3Q15768 340 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 VKORC1L1Q8N0U8 176 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 GAL3ST2Q9H3Q3 398 aa16.74■□□□□ 0.27
CHRNA3-202ENST00000348639 CACNA1AO00555 2505 aa16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 SCAF4O95104 1147 aaKnown RBP16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 GNG10P50151 68 aa16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 ZNF383Q8NA42 475 aa16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 VSIRQ9H7M9 311 aa16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 TMEM140Q9NV12 185 aa16.73■□□□□ 0.27
CHRNA3-202ENST00000348639 NBASA2RRP1 2371 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 PLAUP00749 431 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 VWC2Q2TAL6 325 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 TMEM41BQ5BJD5 291 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 MBD3L1Q8WWY6 194 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 C15orf62A8K5M9 175 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 B9A039 149 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 FCN3O75636 299 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 ZNF429Q86V71 674 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 CLDND2Q8NHS1 167 aa16.72■□□□□ 0.27
CHRNA3-202ENST00000348639 HCFC1P51610 2035 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 ARG1P05089 322 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 OR13C7P0DN81 318 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 LY6DQ14210 128 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 ZNF726P1Q15940 193 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 HAGHQ16775 308 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 ZNF506Q5JVG8 444 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 DOCK11Q5JSL3 2073 aa16.71■□□□□ 0.27
CHRNA3-202ENST00000348639 TRAV3A0A0B4J244 114 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 DAOP14920 347 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 RPP30P78346 268 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 CDSNQ15517 529 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 HEPN1Q6WQI6 88 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 ZCCHC14Q8WYQ9 949 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 RCC1LQ96I51 464 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 RHOVQ96L33 236 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 ZNF714Q96N38 554 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 CLCC1Q96S66 551 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 NDUFB3O43676 98 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 HSPB1P04792 205 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 YLPM1P49750 1951 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 ADORA2A-AS1P86434 159 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 ICAM4Q14773 271 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 LRRC10Q5BKY1 277 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 LYPD2Q6UXB3 125 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 CA5BP1Q8WTZ4 195 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 AIFM2Q9BRQ8 373 aa16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 CISD1Q9NZ45 108 aaKnown RBP16.7■□□□□ 0.26
CHRNA3-202ENST00000348639 VDAC2P45880 294 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 POU2AF1Q16633 256 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 SOHLH1Q5JUK2 328 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 UNKLQ9H9P5 680 aaKnown RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 KAAG1Q9UBP8 84 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 C15orf61A6NNL5 157 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 SRP19P09132 144 aaKnown RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 MDKP21741 143 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 FGF7P21781 194 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 ELLP55199 621 aaPredicted RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 RPS16P62249 146 aaKnown RBP16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 KHDC3LQ587J8 217 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 AWAT1Q58HT5 328 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 ZNF787Q6DD87 383 aa16.69■□□□□ 0.26
CHRNA3-202ENST00000348639 IGHV1-69-2A0A0G2JMI3 117 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 HRASP01112 189 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 CT45A6P0DMU7 189 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 CT45A5P0DMU8 189 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 CT45A7P0DMV0 189 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 CCL3L1P16619 93 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 ERVFRD-1P60508 538 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 HFEQ30201 348 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 OR4A47Q6IF82 309 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 LCN15Q6UWW0 184 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 SSX7Q7RTT5 188 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 HEYLQ9NQ87 328 aaPredicted RBP16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 SMCO4Q9NRQ5 59 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 TCF19Q9Y242 345 aa16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 FOXA2Q9Y261 457 aaPredicted RBP16.68■□□□□ 0.26
CHRNA3-202ENST00000348639 COL6A6A6NMZ7 2263 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 IFNA10P01566 189 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 UNQ6494/PRO21346Q6UXR6 183 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 H1FXQ92522 213 aaKnown RBP16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 TMEM14BQ9NUH8 114 aa16.67■□□□□ 0.26
CHRNA3-202ENST00000348639 CTSZQ9UBR2 303 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms