RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 CA1P00915 261 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-202ENST00000347401 PPBPP02775 128 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 ZNF83P51522 516 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 NUBP1P53384 320 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 C16orf92Q96LL3 132 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 DERL1Q9BUN8 251 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 HOXA5P20719 270 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 RPL31P62899 125 aaKnown RBP11.52□□□□□ -0.57
COL6A3-202ENST00000347401 OPN3Q9H1Y3 402 aaPredicted RBP11.52□□□□□ -0.57
COL6A3-202ENST00000347401 TBL2Q9Y4P3 447 aaKnown RBP11.52□□□□□ -0.57
COL6A3-202ENST00000347401 A0A1B0GWB2 263 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 OR10J3Q5JRS4 329 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 DNM1P46Q6ZS02 220 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 IL36RNQ9UBH0 155 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 FAM106CPP0CH98 169 aa11.52□□□□□ -0.57
COL6A3-202ENST00000347401 CD3EP07766 207 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 CITED2Q99967 270 aaPredicted RBP11.51□□□□□ -0.57
COL6A3-202ENST00000347401 WDYHV1Q96HA8 205 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 SPCS1Q9Y6A9 102 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 MED19A0JLT2 244 aaPredicted RBP11.51□□□□□ -0.57
COL6A3-202ENST00000347401 DXOO77932 396 aaKnown RBP11.51□□□□□ -0.57
COL6A3-202ENST00000347401 IGHMP01871 453 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 ZNF124Q15973 351 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 PIGYQ3MUY2 71 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 UNQ9370/PRO34162Q6UXP9 181 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 CTSSP25774 331 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 GPR82Q96P67 336 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 CIARTQ8N365 385 aaPredicted RBP11.51□□□□□ -0.57
COL6A3-202ENST00000347401 CCL17Q92583 94 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 C5orf66Q9H5L9 145 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 RABAC1Q9UI14 185 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 METTL12A8MUP2 240 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 H2BFSP57053 126 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 TIMM23BQ5SRD1 257 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 FBXW9Q5XUX1 488 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 FAM117AQ9C073 453 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 ALPK3Q96L96 1907 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 ASAH2BP0C7U1 165 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 HTN1P15515 57 aa11.51□□□□□ -0.57
COL6A3-202ENST00000347401 CHCHD1Q96BP2 118 aaKnown RBP11.51□□□□□ -0.57
COL6A3-202ENST00000347401 ANOS1P23352 680 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 GZMMP51124 257 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 FBXO17Q96EF6 278 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 GNB1LQ9BYB4 327 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 PCOLCE2Q9UKZ9 415 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 TRBV5-7A0A0A0MS05 114 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 BGLAPP02818 100 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ERGP11308 486 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ZNF137PP52743 207 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 PSG6Q00889 435 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-202ENST00000347401 YAE1D1Q9NRH1 226 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 SLC25A10Q9UBX3 287 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-202ENST00000347401 PCDH15Q96QU1 1955 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 MT-CO3P00414 261 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 RNF224P0DH78 156 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 COX5BP10606 129 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ORMDL3Q8N138 153 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 DCAF12L2Q5VW00 463 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 CACNG8Q8WXS5 425 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 SPINK9Q5DT21 86 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 S100A7L2Q5SY68 101 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ZFAND6Q6FIF0 208 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 CXorf67Q86X51 503 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-202ENST00000347401 RGP1Q92546 391 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-202ENST00000347401 SARGQ9BW04 601 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 MS4A6AQ9H2W1 248 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 FLRT3Q9NZU0 649 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 SMPXQ9UHP9 88 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 ID4P47928 161 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 P2RY4P51582 365 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 LAMTOR1Q6IAA8 161 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 LAMTOR2Q9Y2Q5 125 aa11.5□□□□□ -0.57
COL6A3-202ENST00000347401 MRPS18BQ9Y676 258 aaKnown RBP11.5□□□□□ -0.57
COL6A3-202ENST00000347401 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 MEIG1Q5JSS6 88 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 OR9G4Q8NGQ1 327 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 PRDM14Q9GZV8 571 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 TNFRSF19Q9NS68 423 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 CTGFP29279 349 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 RPL27AP46776 148 aaKnown RBP11.49□□□□□ -0.57
COL6A3-202ENST00000347401 IFITM3Q01628 133 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 ATP5L2Q7Z4Y8 100 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 POC1AQ8NBT0 407 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 SMOC1Q9H4F8 434 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 TIMP4Q99727 224 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 C3orf80F5H4A9 247 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 CDIPTO14735 213 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 GDF9O60383 454 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 MPZL1O95297 269 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 C1QAP02745 245 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 MFAP4P55083 255 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 HSPE1P61604 102 aaKnown RBP11.49□□□□□ -0.57
COL6A3-202ENST00000347401 CT83Q5H943 113 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 OR13C6PQ8NH95 151 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 CLDND2Q8NHS1 167 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 PLPPR1Q8TBJ4 325 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 RASL10BQ96S79 203 aa11.49□□□□□ -0.57
COL6A3-202ENST00000347401 TMPRSS3P57727 454 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms