RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 SNAPINO95295 136 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 IFNA17P01571 189 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SFTA3P0C7M3 94 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 DAOP14920 347 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LRRC75BQ2VPJ9 315 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PUSL1Q8N0Z8 303 aaKnown RBP11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CLRN3Q8NCR9 226 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 ADTRPQ96IZ2 230 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SCRT1Q9BWW7 348 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TMEM140Q9NV12 185 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 DCHS2Q6V1P9 2916 aa11.58□□□□□ -0.56
CDK5RAP1-202ENST00000346416 FAM157AC9JC47 383 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 GPR37O15354 613 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PPIHO43447 177 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LOXP28300 417 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TFF3Q07654 80 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 GUK1Q16774 197 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SMUG1Q53HV7 270 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TRAV3A0A0B4J244 114 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 FAM74A7A6NL05 159 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PMS2P5A8MQ11 134 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LYNX1G3V0Z9 82 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 NDUFA2O43678 99 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 H2AFB1P0C5Y9 115 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LYNX1P0DP58 116 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RELBQ01201 579 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 FAM74A3Q4VXF1 159 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RBMXL1Q96E39 390 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RHOVQ96L33 236 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TMEM204Q9BSN7 226 aa11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 WDR61Q9GZS3 305 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 EIF5A2Q9GZV4 153 aaKnown RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 HRNRQ86YZ3 2850 aaPredicted RBP11.57□□□□□ -0.56
CDK5RAP1-202ENST00000346416 UBE2L5PA0A1B0GUS4 154 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 F12P00748 615 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CT45A6P0DMU7 189 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CT45A5P0DMU8 189 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CT45A7P0DMV0 189 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 COL8A2P25067 703 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SPCS3P61009 180 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RPS16P62249 146 aaKnown RBP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LFNGQ8NES3 379 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 OR10P1Q8NGE3 313 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PARD6GQ9BYG4 376 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TET2Q6N021 2002 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 OR8U8P0C7N1 319 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CCL20P78556 96 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PEA15Q15121 130 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SPSB3Q6PJ21 355 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 DPPA3Q6W0C5 159 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 OR52E5Q8NH55 327 aa11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TAF15Q92804 592 aaKnown RBP eCLIP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PSMG3Q9BT73 122 aaPredicted RBP11.56□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PPT1P50897 306 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TLE4Q04727 773 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 OR4A47Q6IF82 309 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SFT2D1Q8WV19 159 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PINX1Q96BK5 328 aaKnown RBP11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PBDC1Q9BVG4 233 aa11.55□□□□□ -0.56
CDK5RAP1-202ENST00000346416 IGKV1-16P04430 117 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 ZNF429Q86V71 674 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RPRMQ9NS64 109 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 BTBD17A6NE02 478 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 C15orf62A8K5M9 175 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 HRASP01112 189 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PPOXP50336 477 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 GNB2P62879 340 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SERF2P84101 59 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TMEM155Q4W5P6 130 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SP5Q6BEB4 398 aaPredicted RBP11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 FAM122CQ6P4D5 195 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 ZNF833PQ6ZTB9 187 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RAB39BQ96DA2 213 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TMEM147Q9BVK8 224 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 SLC35D1Q9NTN3 355 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 MALRD1Q5VYJ5 2156 aa11.54□□□□□ -0.56
CDK5RAP1-202ENST00000346416 C15orf61A6NNL5 157 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 LY86O95711 162 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 ARG1P05089 322 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 DLX6P56179 175 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 HNF4GQ14541 408 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RTL8BQ17RB0 113 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 DHRS7BQ6IAN0 325 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 HIPK2Q9H2X6 1198 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 HEYLQ9NQ87 328 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TCF19Q9Y242 345 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 A0A1B0GW64 132 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 IFNA10P01566 189 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 POU2AF1Q16633 256 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 OR13D1Q8NGV5 346 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 RARRES2Q99969 163 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TMEM14BQ9NUH8 114 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
CDK5RAP1-202ENST00000346416 TNCP24821 2201 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms