RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 WNT5BQ9H1J7 359 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TMEM160Q9NX00 188 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 WNT16Q9UBV4 365 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TRBV6-7A0A0A0MS04 114 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TMPRSS2O15393 492 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 IL6RP08887 468 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TBR1Q16650 682 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 ORAOV1Q8WV07 137 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 NEUROG1Q92886 237 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 ZDHHC16Q969W1 377 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 C18orf15Q96N68 181 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 SIT1Q9Y3P8 196 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TMEM229AB2RXF0 380 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 CCL3P10147 92 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 MRPL52Q86TS9 123 aaKnown RBP10.34□□□□□ -0.75
COL12A1-202ENST00000345356 MOGAT3Q86VF5 341 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 C10orf126Q8N4M7 172 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 DRAM1Q8N682 238 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 OR51G1Q8NGK1 321 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 MPZP25189 248 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 HIST1H1AQ02539 215 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-202ENST00000345356 RELQ04864 619 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-202ENST00000345356 ADIPOQQ15848 244 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 GAB4Q2WGN9 574 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 TCF24Q7RTU0 167 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 HS3ST3B1Q9Y662 390 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 ADAMTSL3P82987 1691 aa10.34□□□□□ -0.75
COL12A1-202ENST00000345356 IZUMO1RA6ND01 250 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 OR11H12B2RN74 326 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 TMEM256Q8N2U0 113 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 OR11H1Q8NG94 326 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 OR11H2Q8NH07 326 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 IGHV3OR15-7A0A075B7D8 119 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 CCL17Q92583 94 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 SNHG12Q9BXW3 62 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 BEX4Q9NWD9 120 aaPredicted RBP10.33□□□□□ -0.76
COL12A1-202ENST00000345356 WNK3Q9BYP7 1800 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 PAPPAQ13219 1627 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 KNTC1P50748 2209 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 H3BTX0 84 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 DLL1O00548 723 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 REG1BP48304 166 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 SCNM1Q9BWG6 230 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 BTAF1O14981 1849 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 A0A1B0GW64 132 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 PGPEP1LA6NFU8 196 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 Q6ZS52 159 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 TCF19Q9Y242 345 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 MKRN2OSH3BPM6 223 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 GOSR1O95249 250 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 HSPE1P61604 102 aaKnown RBP10.33□□□□□ -0.76
COL12A1-202ENST00000345356 CTHRC1Q96CG8 243 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 LOXL4Q96JB6 756 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 PLA2G2FQ9BZM2 168 aa10.33□□□□□ -0.76
COL12A1-202ENST00000345356 DOCK5Q9H7D0 1870 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 RBFOX2O43251 390 aaKnown RBP eCLIP10.32□□□□□ -0.76
COL12A1-202ENST00000345356 IGHMP01871 453 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 LIFP15018 202 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 GNB2P62879 340 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 MBNL2Q5VZF2 373 aaKnown RBP10.32□□□□□ -0.76
COL12A1-202ENST00000345356 PNKDQ8N490 385 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 C19orf24Q9BVV8 132 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 SFXN3Q9BWM7 321 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 RNASE7Q9H1E1 156 aaKnown RBP10.32□□□□□ -0.76
COL12A1-202ENST00000345356 SELENOKQ9Y6D0 94 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 TRPM6Q9BX84 2022 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 PRR32B1ATL7 298 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 SPINT1O43278 529 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 NPSP0C0P6 89 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 BMI1P35226 326 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 DIRC2Q96SL1 478 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 KLK15Q9H2R5 256 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 TSPAN7P41732 249 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 OR10J3Q5JRS4 329 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 GUSBP11Q6P575 273 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 VKORC1L1Q8N0U8 176 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 CHRNA10Q9GZZ6 450 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 PRSS2P07478 247 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 RND2P52198 227 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 C1orf185Q5T7R7 199 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 GATAD1Q8WUU5 269 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 PRDX2P32119 198 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 CKS1BP61024 79 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 KLRB1Q12918 225 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 ZNF658BQ4V348 819 aaPredicted RBP10.32□□□□□ -0.76
COL12A1-202ENST00000345356 TEX29Q8N6K0 151 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
COL12A1-202ENST00000345356 NHP2Q9NX24 153 aaKnown RBP10.32□□□□□ -0.76
COL12A1-202ENST00000345356 ADAMTS7Q9UKP4 1686 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 CHD5Q8TDI0 1954 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 TRAV30A0A087WSZ9 112 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 A0A0J9YW62 118 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 NAPSAO96009 420 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 IFI6P09912 130 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 ZNF788Q6ZQV5 615 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 SFTPA2Q8IWL1 248 aa10.31□□□□□ -0.76
COL12A1-202ENST00000345356 MRPL32Q9BYC8 188 aaKnown RBP10.31□□□□□ -0.76
COL12A1-202ENST00000345356 CLEC1BQ9P126 229 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms