RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 KBTBD11O94819 623 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 NDUFA6P56556 154 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 NEUROG1Q92886 237 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 WSB1Q9Y6I7 421 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 C12orf77C9JDV5 145 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 EBLN2Q6P2I7 272 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 TRAV40A0A0B4J280 105 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 CCL1P22362 96 aa13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 OSR1Q8TAX0 266 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 NKX6-2Q9C056 277 aaPredicted RBP13.83□□□□□ -0.2
SMARCA4-201ENST00000344626 RNASEK-C17orf49H0YIS7 233 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 OPN4Q9UHM6 478 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF429Q86V71 674 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 EPG5Q9HCE0 2579 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 IGHV1-46P01743 117 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 B4DSR2 109 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 GBF1Q92538 1859 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 DPRXA6NFQ7 191 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 F5H697 171 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 CXorf1O96002 111 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 RELQ04864 619 aaPredicted RBP13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 WDR82Q6UXN9 313 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 DRAM1Q8N682 238 aa13.82□□□□□ -0.2
SMARCA4-201ENST00000344626 NUP210Q8TEM1 1887 aaPredicted RBP13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 GATCO43716 136 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 TMEM241Q24JQ0 296 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 OVCH2Q7RTZ1 564 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 FGFBP3Q8TAT2 258 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 PITX3O75364 302 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 G3V3Q6 166 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 C1QL2Q7Z5L3 287 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 OR4X2Q8NGF9 303 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 A6NNC1 897 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 M0QZK8 103 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 CRYGSP22914 178 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF146Q15072 292 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 IGF2-ASQ6U949 168 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 SELENOHQ8IZQ5 122 aaKnown RBP13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 RBKSQ9H477 322 aa13.81□□□□□ -0.2
SMARCA4-201ENST00000344626 HPXP02790 462 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 MMP7P09237 267 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 TMEM255AQ5JRV8 349 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 FAM169BQ8N8A8 192 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 A0A0G2JK05 382 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 KIAA1324LA8MWY0 1029 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 ANKRD55Q3KP44 614 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 OR13A1Q8NGR1 328 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 NPFFR1Q9GZQ6 430 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 SRD5A1P18405 259 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 CYB5R2Q6BCY4 276 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF525Q8N782 197 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 RD3LP0DJH9 198 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 RPEL1Q2QD12 228 aa13.8□□□□□ -0.2
SMARCA4-201ENST00000344626 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 RAB9AP51151 201 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 GAMTQ14353 236 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 LAIR2Q6ISS4 152 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 RGP1Q92546 391 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 S1PR2O95136 353 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 PLAUP00749 431 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 CCL3L1P16619 93 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 OR10J1P30954 320 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 WNT5AP41221 380 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 FGF8P55075 233 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 CLEC9AQ6UXN8 241 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 NABP1Q96AH0 204 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 GPR146Q96CH1 333 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 PHF3Q92576 2039 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 MOSP00540 346 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 TPPP2P59282 170 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 FABP9Q0Z7S8 132 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 MED13Q9UHV7 2174 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 SCGB1D1O95968 90 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 RPL30P62888 115 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 DPPA3Q6W0C5 159 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF818PQ6ZRF7 136 aa13.79□□□□□ -0.2
SMARCA4-201ENST00000344626 IGKV1D-33P01593 117 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 IGKV1-33P01594 117 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 CD74P04233 296 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 Q96MF0 132 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 BPESC1Q9GZL8 116 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 CTXND1A0A1B0GTU2 59 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 ACAA1P09110 424 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 IGFBP3P17936 291 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 EAF1Q96JC9 268 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 A0A087WV48 116 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 UNC119Q13432 240 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 CLLU1Q5K131 121 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 ZNF362Q5T0B9 420 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 PAXXQ9BUH6 204 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 ELOVL1Q9BW60 279 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 PLSCR3Q9NRY6 295 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 NCMAPQ5T1S8 102 aa13.78□□□□□ -0.2
SMARCA4-201ENST00000344626 C16orf92Q96LL3 132 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms