RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 DSCAML1Q8TD84 2053 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 CGB3P0DN86 165 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 CGB7P0DN87 165 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 PMS2P11Q13670 270 aa17.69■□□□□ 0.42
CCDC38-201ENST00000344280 TRGC2P03986 189 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 AARDQ4LEZ3 155 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 DEFB108BQ8NET1 73 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 RPUSD4Q96CM3 377 aaKnown RBP17.68■□□□□ 0.42
CCDC38-201ENST00000344280 SMIM7Q9BQ49 75 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 RRHO14718 337 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 SMIM6P0DI80 62 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 LINC00469Q8N7U9 141 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 GCM1Q9NP62 436 aa17.68■□□□□ 0.42
CCDC38-201ENST00000344280 RELBQ01201 579 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 CT45A1Q5HYN5 189 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 ZNF709Q8N972 641 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 OR4A16Q8NH70 328 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 CT45A3Q8NHU0 189 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 DCAF16Q9NXF7 216 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 PIEZO2Q9H5I5 2752 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 IFITM10A6NMD0 228 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 MBP02144 154 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 BMP5P22003 454 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 CD1BP29016 333 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 EIF2S3P41091 472 aaKnown RBP17.67■□□□□ 0.42
CCDC38-201ENST00000344280 TMEM170AQ8WVE7 144 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 ACTR3CQ9C0K3 210 aaPredicted RBP17.67■□□□□ 0.42
CCDC38-201ENST00000344280 TMEM140Q9NV12 185 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 DOK5Q9P104 306 aa17.67■□□□□ 0.42
CCDC38-201ENST00000344280 ACACAQ13085 2346 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 CLDN34H7C241 214 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BKO60814 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 IFNA10P01566 189 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BJP06899 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BOP23527 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BBP33778 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 TIMP3P35625 211 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 PSMB3P49720 205 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 RND2P52198 227 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 NDUFA6P56556 154 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BDP58876 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BCP62807 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 ADIRFQ15847 76 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST2H2BEQ16778 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.66■□□□□ 0.42
CCDC38-201ENST00000344280 TCF23Q7RTU1 214 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 DDB2Q92466 427 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BHQ93079 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 S1PR3Q99500 378 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BNQ99877 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 HIST1H2BMQ99879 126 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 PCNX1Q96RV3 2341 aa17.66■□□□□ 0.42
CCDC38-201ENST00000344280 TRAV38-1A0A0B4J264 116 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 IGHV1-46P01743 117 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 VDAC2P45880 294 aaPredicted RBP17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SPCS3P61009 180 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 TCF15Q12870 199 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SPNS3Q6ZMD2 512 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 ABHD12Q8N2K0 398 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 OR4F5Q8NH21 305 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 FAM210BQ96KR6 192 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 OR4F4Q96R69 305 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 TMEM242Q9NWH2 141 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 WDR83OSQ9Y284 106 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SAA2-SAA4A0A096LPE2 208 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SMCO3A2RU48 225 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 PAGE4O60829 102 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SAA2P0DJI9 122 aaPredicted RBP17.65■□□□□ 0.42
CCDC38-201ENST00000344280 SNRNP40Q96DI7 357 aaKnown RBP17.65■□□□□ 0.42
CCDC38-201ENST00000344280 PARLQ9H300 379 aa17.65■□□□□ 0.42
CCDC38-201ENST00000344280 RAI1Q7Z5J4 1906 aaPredicted RBP17.65■□□□□ 0.42
CCDC38-201ENST00000344280 KLK10O43240 276 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 GFRA3O60609 400 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 S100A9P06702 114 aaKnown RBP17.64■□□□□ 0.41
CCDC38-201ENST00000344280 GATA4P43694 442 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 TNFAIP6P98066 277 aaPredicted RBP17.64■□□□□ 0.41
CCDC38-201ENST00000344280 FAM222BQ8WU58 562 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 HEYLQ9NQ87 328 aaPredicted RBP17.64■□□□□ 0.41
CCDC38-201ENST00000344280 NAT8Q9UHE5 227 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 RBFOX2O43251 390 aaKnown RBP eCLIP17.64■□□□□ 0.41
CCDC38-201ENST00000344280 KBTBD11O94819 623 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 HOXA5P20719 270 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 CCKARP32238 428 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 RTP5Q14D33 572 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 CYP2G1PQ6ZSU1 146 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 CCL13Q99616 98 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 GFOD1Q9NXC2 390 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 RNF7Q9UBF6 113 aa17.64■□□□□ 0.41
CCDC38-201ENST00000344280 CUL9Q8IWT3 2517 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 KBTBD11-OT1A0A1B0GTJ5 212 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 FAM90A9PA6NNJ1 464 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 A8MXE2 369 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 PRSS46E5RG02 174 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 C17orf112F2Z3M2 114 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 MMP23AO75900 390 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 CEACAM8P31997 349 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-201ENST00000344280 CDC34P49427 236 aaPredicted RBP17.63■□□□□ 0.41
CCDC38-201ENST00000344280 ERVK-16P61578 105 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 TMEM241Q24JQ0 296 aa17.63■□□□□ 0.41
CCDC38-201ENST00000344280 STUMQ69YW2 141 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms