RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 K7N7A8 449 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 CAPZBP47756 277 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 OR1N1Q8NGS0 311 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 DNASE2BQ8WZ79 361 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 RPL31P62899 125 aaKnown RBP11.77□□□□□ -0.52
TRIO-202ENST00000344204 OR10J3Q5JRS4 329 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 C10orf91Q5T1B1 145 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 OR4D5Q8NGN0 318 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 OR2I1PQ8NGU4 316 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 VSTM2LQ96N03 204 aa11.77□□□□□ -0.52
TRIO-202ENST00000344204 TSPAN2O60636 221 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 DYNLRB1Q9NP97 96 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 CA11O75493 328 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 MST1P26927 711 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 OR13C6PQ8NH95 151 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 NPCDR1Q9BY65 106 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 FGF22Q9HCT0 170 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 A0A0U1RQV5 110 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 CD46P15529 392 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 PAX2Q02962 417 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 SPINK8P0C7L1 97 aa11.77□□□□□ -0.53
TRIO-202ENST00000344204 COPS9Q8WXC6 57 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 TRAV1-1A0A0B4J248 108 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 FAM78AQ5JUQ0 283 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 GCHFRP30047 84 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 PLPPR1Q8TBJ4 325 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 IZUMO1RA6ND01 250 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 TDGF1P13385 188 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
TRIO-202ENST00000344204 ABHD14AQ9BUJ0 271 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 WNT16Q9UBV4 365 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 YRDCQ86U90 279 aaKnown RBP11.76□□□□□ -0.53
TRIO-202ENST00000344204 PRSS27Q9BQR3 290 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 TMEM50AO95807 157 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
TRIO-202ENST00000344204 CLEC5AQ9NY25 188 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 hADV38S2A0JD32 116 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 LYG1Q8N1E2 194 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 PPIAL4EA0A075B759 164 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 PPIAL4FP0DN26 164 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 RTBDNQ9BSG5 229 aaPredicted RBP11.76□□□□□ -0.53
TRIO-202ENST00000344204 HCSTQ9UBK5 93 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 PPIAL4AQ9Y536 164 aa11.76□□□□□ -0.53
TRIO-202ENST00000344204 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 ZIC1Q15915 447 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.532e-6■■■■□ 19.6
TRIO-202ENST00000344204 CA7P43166 264 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 HOXA4Q00056 320 aaPredicted RBP11.75□□□□□ -0.53
TRIO-202ENST00000344204 CT62P0C5K7 136 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 STPG3Q8N7X2 389 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 POLR3KQ9Y2Y1 108 aaPredicted RBP11.75□□□□□ -0.53
TRIO-202ENST00000344204 OR11H12B2RN74 326 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 BGLAPP02818 100 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 CFAP161Q6P656 301 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 OR11H1Q8NG94 326 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 OR11H2Q8NH07 326 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 CYB561P49447 251 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 HES3Q5TGS1 186 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 TCF24Q7RTU0 167 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 WFDC6Q9BQY6 131 aa11.75□□□□□ -0.53
TRIO-202ENST00000344204 SHISA8B8ZZ34 492 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 BEX4Q9NWD9 120 aaPredicted RBP11.74□□□□□ -0.53
TRIO-202ENST00000344204 TMEM238C9JI98 176 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 RFESDQ8TAC1 157 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 FGF21Q9NSA1 209 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 ATXN7O15265 892 aaPredicted RBP11.74□□□□□ -0.53
TRIO-202ENST00000344204 VSTM2AQ8TAG5 236 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 RSPO3Q9BXY4 272 aaPredicted RBP11.74□□□□□ -0.53
TRIO-202ENST00000344204 MS4A6AQ9H2W1 248 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 LINC01555Q8NAE3 123 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 TMEM189A5PLL7 270 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 A6NCN8 305 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 KCNMB1Q16558 191 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 ZNF788Q6ZQV5 615 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 LOC105371242A0A075B767 164 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 PPIAL4CA0A0B4J2A2 164 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 ODAMA1E959 279 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 ZNF716A6NP11 495 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 PPIAL4GP0DN37 164 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 ANKRD33Q7Z3H0 272 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 THAP10Q9P2Z0 257 aaPredicted RBP11.74□□□□□ -0.53
TRIO-202ENST00000344204 ADIPOQQ15848 244 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 PLSCR4Q9NRQ2 329 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 CD38P28907 300 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 FER1L6-AS1Q8NA97 138 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 OR9G4Q8NGQ1 327 aa11.74□□□□□ -0.53
TRIO-202ENST00000344204 NHP2Q9NX24 153 aaKnown RBP11.74□□□□□ -0.53
TRIO-202ENST00000344204 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 LIPT2A6NK58 231 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 IGFBP6P24592 240 aaPredicted RBP11.73□□□□□ -0.53
TRIO-202ENST00000344204 CRYBA2P53672 197 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 CBLN3Q6UW01 205 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 C17orf51A8MQB3 221 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 H0YIZ8 118 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 ZNF32P17041 273 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 OR52E5Q8NH55 327 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 DUSP23Q9BVJ7 150 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 SARGQ9BW04 601 aa11.73□□□□□ -0.53
TRIO-202ENST00000344204 WBP1LQ9NX94 342 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms