RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CELA2AP08217 269 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SCTP09683 121 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 IGLC1P0CG04 106 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 LMO1P25800 156 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SLC25A47Q6Q0C1 308 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 HOGA1Q86XE5 327 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 VGLL1Q99990 258 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FNDC4Q9H6D8 234 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 IL36BQ9NZH7 164 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 AZU1P20160 251 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PRDX2P32119 198 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PTGER1P34995 402 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF683Q8IZ20 524 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 RNASE8Q8TDE3 154 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FMC1Q96HJ9 113 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 DUX3Q96PT4 197 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FGFBP2Q9BYJ0 223 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 OVOL1O14753 267 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CD38P28907 300 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CGGBP1Q9UFW8 167 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 LILRA1O75019 489 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 MAGEA5P43359 124 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 RTP5Q14D33 572 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 BCL6BQ8N143 479 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 BRK1Q8WUW1 75 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SNRNP40Q96DI7 357 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 AJAP1Q9UKB5 411 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PLPP3O14495 311 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PFN1P07737 140 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 C1QL2Q7Z5L3 287 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ZDHHC23Q8IYP9 409 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SSMEM1Q8WWF3 244 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 MS4A18H0YCH9 400 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 MALP21145 153 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 RPL11P62913 178 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 C17orf67Q0P5P2 114 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SFTA2Q6UW10 78 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 C15orf53Q8NAA6 179 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PLAC1Q9HBJ0 212 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 LYRM4Q9HD34 91 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TNRC6AQ8NDV7 1962 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 RPL32P62910 135 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PRSS45Q7RTY3 260 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 IL1F10Q8WWZ1 152 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 VSIG2Q96IQ7 327 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 Q96M85 177 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FCGR2AP12318 317 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CACNG8Q8WXS5 425 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 MYO5BQ9ULV0 1848 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 GRPP07492 148 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CLDN2P57739 230 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 GNG5P63218 68 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TUBGCP6Q96RT7 1819 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 UPK3BL1B0FP48 263 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 UPK3BL2E5RIL1 263 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM50BP56557 158 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ALKBH6Q3KRA9 238 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SS18L2Q9UHA2 77 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ABCA2Q9BZC7 2435 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CER1O95813 267 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TMEM177Q53S58 311 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 C19orf54Q5BKX5 351 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SYT8Q8NBV8 401 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TAS2R4Q9NYW5 299 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PTGDR2Q9Y5Y4 395 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TIAM2Q8IVF5 1701 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 TRAV13-1A0A0B4J241 112 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 GABRG2P18507 467 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ANXA2RQ3ZCQ2 193 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 CLDN23Q96B33 292 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 MVB12AQ96EY5 273 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 IZUMO1RA6ND01 250 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 EMDP50402 254 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 FAM110CQ1W6H9 321 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ACP7Q6ZNF0 438 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ORMDL3Q8N138 153 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ZNHIT1O43257 154 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 RBM3P98179 157 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 H1FNTQ75WM6 255 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 DIRC2Q96SL1 478 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 NXT1Q9UKK6 140 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 KLF13Q9Y2Y9 288 aaPredicted RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SGCBQ16585 318 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PRSS2P07478 247 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 PMP22Q01453 160 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 ZNF114Q8NC26 417 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SDF2L1Q9HCN8 221 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 IGKV6D-41A0A0C4DH26 115 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
SYNE2-202ENST00000344113 SLC25A22Q9H936 323 aa3.24□□□□□ -1.89
SYNE2-202ENST00000344113 POLR2AP24928 1970 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1BA6NDE4 496 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1EA6NEQ0 496 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 J3QRE1 110 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1DP0C7P1 496 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1A1P0DJD3 496 aaKnown RBP3.23□□□□□ -1.89
SYNE2-202ENST00000344113 RBMY1CP0DJD4 496 aa3.23□□□□□ -1.89
SYNE2-202ENST00000344113 ADRA1AP35348 466 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms