RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 SRP19P09132 144 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 CALCBP10092 127 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SCGB1A1P11684 91 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 CD99P14209 185 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ZNF32P17041 273 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 CD1BP29016 333 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 GABRA2P47869 451 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 DAP3P51398 398 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 RND3P61587 244 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 RAB11AP62491 216 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SUMO1P63165 101 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 ZNF92Q03936 586 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 MEP1BQ16820 701 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 BSXQ3C1V8 233 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SPATA45Q537H7 98 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 TMEM41BQ5BJD5 291 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 RPL22L1Q6P5R6 122 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 SLC25A42Q86VD7 318 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 LINC00471Q8N535 108 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 LFNGQ8NES3 379 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 TMEM170AQ8WVE7 144 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 NANOS1Q8WY41 292 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 SPSB1Q96BD6 273 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 NMNAT3Q96T66 252 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SMDT1Q9H4I9 107 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 FBXL17Q9UF56 701 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 WSB1Q9Y6I7 421 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 A0A1B0GUS0 222 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 PRSS37A4D1T9 235 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ZNF736B4DX44 427 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 LYNX1G3V0Z9 82 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 PIN1P1O15428 100 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 NUPR1O60356 82 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 YPEL1O60688 119 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 HYPMO75409 117 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 CNIH1O95406 144 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 BRI3O95415 125 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 IGHMP01871 453 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 CD55P08174 381 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 OR10J4P0C629 311 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 PET100P0DJ07 73 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 LYNX1P0DP58 116 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ESDP10768 282 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 GNB3P16520 340 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 MSR1P21757 451 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 RPL12P30050 165 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 FCGR2CP31995 323 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 OTX1P32242 354 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 RPS27P42677 84 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 CNN1P51911 297 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 ZNF133P52736 654 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 RPL23AP62750 156 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 CCL20P78556 96 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 BAXQ07812 192 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SRSF7Q16629 238 aaKnown RBP eCLIP3.89□□□□□ -1.79
VAV3-201ENST00000343258 ALKBH6Q3KRA9 238 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 SPATA46Q5T0L3 261 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 C10orf128Q5T292 105 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ASPHD2Q6ICH7 369 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 MEPCEQ7L2J0 689 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 RTN4RL2Q86UN3 420 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 BOD1L2Q8IYS8 172 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ZNF525Q8N782 197 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 ADAD2Q8NCV1 583 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 CSNK2A3Q8NEV1 391 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 OR52E2Q8NGJ4 325 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 OR2AJ1Q8NGZ0 328 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 YPEL2Q96QA6 119 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 GPX7Q96SL4 187 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 OBP2BQ9NPH6 170 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 TMEM242Q9NWH2 141 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 CGGBP1Q9UFW8 167 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 SS18L2Q9UHA2 77 aa3.89□□□□□ -1.79
VAV3-201ENST00000343258 RCL1Q9Y2P8 373 aaKnown RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 COA3Q9Y2R0 106 aaPredicted RBP3.89□□□□□ -1.79
VAV3-201ENST00000343258 DOCK11Q5JSL3 2073 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 IGHV4-30-2A0A087WSY4 118 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 A0A0U1RQK1 487 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 OR2T8A6NH00 312 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 NPIPB13A6NJU9 1138 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 NPIPB4C9JG80 1138 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 SLC16A7O60669 478 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 CYB5AP00167 134 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 NGFP01138 241 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 SEC11BP0C7V7 166 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 SLC6A6P31641 620 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 EFNB2P52799 333 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 RPS11P62280 158 aaKnown RBP eCLIP3.88□□□□□ -1.79
VAV3-201ENST00000343258 MRPS34P82930 218 aaKnown RBP3.88□□□□□ -1.79
VAV3-201ENST00000343258 PSG4Q00888 419 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 ZNF85Q03923 595 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 ACOT6Q3I5F7 207 aaPredicted RBP3.88□□□□□ -1.79
VAV3-201ENST00000343258 COLCA1Q6ZS62 124 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 Q6ZWC4 215 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 TCF24Q7RTU0 167 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 COMMD2Q86X83 199 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 FBXL14Q8N1E6 418 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 FER1L6-AS1Q8NA97 138 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 OR4B1Q8NGF8 309 aa3.88□□□□□ -1.79
VAV3-201ENST00000343258 OR52L1Q8NGH7 329 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms