RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 RPRMLQ8N4K4 120 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 SNRNP40Q96DI7 357 aaKnown RBP10.53□□□□□ -0.72
LMX1A-202ENST00000342310 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
LMX1A-202ENST00000342310 IGHV3-72A0A0B4J1Y9 119 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 TMPRSS2O15393 492 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 NTF3P20783 257 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 KITLGP21583 273 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 PRDX2P32119 198 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 DAZAP2Q15038 168 aaPredicted RBP10.52□□□□□ -0.73
LMX1A-202ENST00000342310 MRGPRGQ86SM5 289 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 BAGE3Q86Y29 109 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 BAGE2Q86Y30 109 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 OR2V2Q96R30 315 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 RELNP78509 3460 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 MDFIC2A0A1B0GVS7 189 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 IFITM10A6NMD0 228 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 A6NNC1 897 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 IGHV2-5P01817 119 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 GYPAP02724 150 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 SELENOVP59797 346 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 ZNF90Q03938 601 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 ZNF506Q5JVG8 444 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 CCL13Q99616 98 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
LMX1A-202ENST00000342310 RNF115Q9Y4L5 304 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 CSPG4Q6UVK1 2322 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 ACACBO00763 2458 aa10.52□□□□□ -0.73
LMX1A-202ENST00000342310 SLC17A3O00476 420 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 CYB5R3P00387 301 aaPredicted RBP10.51□□□□□ -0.73
LMX1A-202ENST00000342310 C1QTNF9P0C862 333 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 OR4P4Q8NGL7 312 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 SPSB4Q96A44 273 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 HIST1H2BLQ99880 126 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 PROCRQ9UNN8 238 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 H0Y8G0 127 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 H3BTX0 84 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 GATCO43716 136 aaKnown RBP10.51□□□□□ -0.73
LMX1A-202ENST00000342310 KRTDAPP60985 99 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 DUX4L9Q6RFH8 374 aaPredicted RBP10.51□□□□□ -0.73
LMX1A-202ENST00000342310 ASCL4Q6XD76 172 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 HIST3H2BBQ8N257 126 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 OR4X1Q8NH49 305 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 CCL17Q92583 94 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 DECR2Q9NUI1 292 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 CENPEQ02224 2701 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 MLNRO43193 412 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 ODF3L1Q8IXM7 274 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 SGMS2Q8NHU3 365 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 TMEM147Q9BVK8 224 aa10.51□□□□□ -0.73
LMX1A-202ENST00000342310 LRRC30A6NM36 301 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 PKIAP61925 76 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 FXYD3Q14802 87 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 Q6ZR03 302 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 COLCA1Q6ZS62 124 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 MOB3BQ86TA1 216 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 ITLN1Q8WWA0 313 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 ZPBPQ9BS86 351 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 TRAPPC1Q9Y5R8 145 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 A0A1W2PRD5 423 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 A0A1W2PRF3 423 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 A0A1W2PRM7 423 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 C17orf112F2Z3M2 114 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 IRF2P14316 349 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 ACP1P24666 158 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 CD1BP29016 333 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 DLX1P56177 255 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 Q6P435 159 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 ZDHHC11Q9H8X9 412 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 DCAF16Q9NXF7 216 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 NAT8Q9UHE5 227 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 OOEPA6NGQ2 149 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 M0R296 226 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 RRHO14718 337 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 SP9P0CG40 484 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 FOLR2P14207 255 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 HIST1H1BP16401 226 aaKnown RBP10.5□□□□□ -0.73
LMX1A-202ENST00000342310 LRRC75BQ2VPJ9 315 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 FAM90A2PQ658T7 463 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 NEIL1Q96FI4 390 aaPredicted RBP10.5□□□□□ -0.73
LMX1A-202ENST00000342310 MS4A10Q96PG2 267 aa10.5□□□□□ -0.73
LMX1A-202ENST00000342310 SEBOXQ9HB31 216 aaPredicted RBP10.5□□□□□ -0.73
LMX1A-202ENST00000342310 OR9G9P0C7N8 305 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ARL14EPLP0DKL9 152 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 HTD2P86397 168 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 MLANAQ16655 118 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ACOT6Q3I5F7 207 aaPredicted RBP10.49□□□□□ -0.73
LMX1A-202ENST00000342310 UTF1Q5T230 341 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ZNF497Q6ZNH5 498 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 TLN2Q9Y4G6 2542 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 F6UZH7 168 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ERVFC1-1P60608 527 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 OR5I1Q13606 314 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ERASQ7Z444 233 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 Q8IYB0 196 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 ZNF645Q8N7E2 425 aa10.49□□□□□ -0.73
LMX1A-202ENST00000342310 TMEM45BQ96B21 275 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms