RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 ZNF114Q8NC26 417 aa10□□□□□ -0.81
RTN3-203ENST00000341307 ST6GALNAC6Q969X2 333 aa10□□□□□ -0.81
RTN3-203ENST00000341307 GMPPAQ96IJ6 420 aaPredicted RBP10□□□□□ -0.81
RTN3-203ENST00000341307 POM121L2Q96KW2 1035 aa10□□□□□ -0.81
RTN3-203ENST00000341307 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
RTN3-203ENST00000341307 PEF1Q9UBV8 284 aaKnown RBP10□□□□□ -0.81
RTN3-203ENST00000341307 MGAQ8IWI9 3026 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 A0A0G2JMM0 328 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 LOC102725191A0A1B0GVB3 256 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 A0A1W2PPB8 328 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 GAGE10A6NGK3 116 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 KIR3DP1A8MWS1 328 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 HMGB3O15347 200 aaKnown RBP9.99□□□□□ -0.81
RTN3-203ENST00000341307 CD5LO43866 347 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 ZNF324O75467 553 aaPredicted RBP9.99□□□□□ -0.81
RTN3-203ENST00000341307 DAP3P51398 398 aaKnown RBP9.99□□□□□ -0.81
RTN3-203ENST00000341307 FUT6P51993 359 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 ID3Q02535 119 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 SLC25A53Q5H9E4 307 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 C1QL2Q7Z5L3 287 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 ZNF295-AS1Q8N0V1 137 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 OR8I2Q8N0Y5 310 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 RPP25LQ8N5L8 163 aaKnown RBP9.99□□□□□ -0.81
RTN3-203ENST00000341307 OR2Z1Q8NG97 314 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 FAM206AQ9NX38 181 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 IGF2RP11717 2491 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 IGHV3-15A0A0B4J1V0 119 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 PGPEP1LA6NFU8 196 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 M0R1X1 148 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 ADAM20O43506 726 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 SLC25A17O43808 307 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 CGAP01215 116 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 CYC1P08574 325 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 MFAP5Q13361 173 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 HLA-DRB5Q30154 266 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 C6orf15Q6UXA7 325 aaPredicted RBP9.99□□□□□ -0.81
RTN3-203ENST00000341307 C6orf201Q7Z4U5 140 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 OR2V2Q96R30 315 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 THYN1Q9P016 225 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 TAAR3PQ9P1P4 343 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 CNTRLQ7Z7A1 2325 aa9.99□□□□□ -0.81
RTN3-203ENST00000341307 H3BP45 60 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 SIRPB1O00241 398 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 RRADP55042 308 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 DMRTC1Q5HYR2 192 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 FAM19A2Q8N3H0 131 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 OR10P1Q8NGE3 313 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 LIN37Q96GY3 246 aaPredicted RBP9.98□□□□□ -0.81
RTN3-203ENST00000341307 ABHD14BQ96IU4 210 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 SLC39A9Q9NUM3 307 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 PGPEP1Q9NXJ5 209 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 KIAA1549Q9HCM3 1950 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 KIAA1324LA8MWY0 1029 aaPredicted RBP9.98□□□□□ -0.81
RTN3-203ENST00000341307 FCN1O00602 326 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 ZNF823P16415 610 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 EGR1P18146 543 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 CDAP32320 146 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 HES3Q5TGS1 186 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 UEVLDQ8IX04 471 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 OR10V1Q8NGI7 309 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 SLC25A40Q8TBP6 338 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 SCGB1C1Q8TD33 95 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 NEIL1Q96FI4 390 aaPredicted RBP9.98□□□□□ -0.81
RTN3-203ENST00000341307 NBEAQ8NFP9 2946 aa9.98□□□□□ -0.81
RTN3-203ENST00000341307 TPRP12270 2363 aaKnown RBP9.97□□□□□ -0.81
RTN3-203ENST00000341307 TMPRSS2O15393 492 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SRD5A2P31213 254 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SERF2P84101 59 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SRSF7Q16629 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
RTN3-203ENST00000341307 CRIP3Q6Q6R5 217 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 C19orf35Q6ZS72 473 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 CHRDL1Q9BU40 450 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 STRADBQ9C0K7 418 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 CENPMQ9NSP4 180 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SHANK1Q9Y566 2161 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 BOD1L1Q8NFC6 3051 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 ZNF850A8MQ14 1090 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 ZIC3O60481 467 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 LIFP15018 202 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 UCP1P25874 307 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 RHOBP62745 196 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 ARL16Q0P5N6 197 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 RNFT1Q5M7Z0 435 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 MRPL21Q7Z2W9 205 aaKnown RBP9.97□□□□□ -0.81
RTN3-203ENST00000341307 FAM58AQ8N1B3 248 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SSC4DQ8WTU2 575 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 DERL1Q9BUN8 251 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 PBOV1Q9GZY1 135 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 TMEM222Q9H0R3 208 aa9.97□□□□□ -0.81
RTN3-203ENST00000341307 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 FAM231BA6NCW3 169 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 AGFG2O95081 481 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 IER3P46695 156 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 CLRN1P58418 232 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.96□□□□□ -0.81
RTN3-203ENST00000341307 ZNF525Q8N782 197 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.81
RTN3-203ENST00000341307 UCN2Q96RP3 112 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms