RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 A0A1W2PRF3 423 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 A0A1W2PRM7 423 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 KCNAB3O43448 404 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 SSSCA1O60232 199 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 HRASP01112 189 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 GAPDHP04406 335 aaKnown RBP14.08□□□□□ -0.15
CLDN4-201ENST00000340958 CEACAM3P40198 252 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 DHRS7BQ6IAN0 325 aaPredicted RBP14.08□□□□□ -0.15
CLDN4-201ENST00000340958 Q6ZRM9 215 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 VKORC1L1Q8N0U8 176 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 ST6GALNAC6Q969X2 333 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 INSIG2Q9Y5U4 225 aa14.08□□□□□ -0.15
CLDN4-201ENST00000340958 E5RGE8 158 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 SHOXO15266 292 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 ZNF137PP52743 207 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 LGALS4P56470 323 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 POLR2GP62487 172 aaKnown RBP eCLIP14.08□□□□□ -0.16
CLDN4-201ENST00000340958 PAX2Q02962 417 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 ACOT7LQ6ZUV0 252 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 MOB3BQ86TA1 216 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 OR11H6Q8NGC7 330 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 OR4P4Q8NGL7 312 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 OR4A16Q8NH70 328 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 AIFM2Q9BRQ8 373 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.08□□□□□ -0.16
CLDN4-201ENST00000340958 NSG2Q9Y328 171 aa14.08□□□□□ -0.16
CLDN4-201ENST00000340958 ARHGAP32A7KAX9 2087 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 A0A0D9SG52 128 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 H0YJW9 148 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 OR2F2O95006 317 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 MC5RP33032 325 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 RAB13P51153 203 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 OR2F1Q13607 317 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 TMUB2Q71RG4 321 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 LRRC75A-AS1Q8N1F1 130 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 LHX4Q969G2 390 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 FLYWCH2Q96CP2 140 aaKnown RBP14.07□□□□□ -0.16
CLDN4-201ENST00000340958 NABP2Q9BQ15 211 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 SIRPDQ9H106 197 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 WASHC3Q9Y3C0 194 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 F8P00451 2351 aa14.07□□□□□ -0.16
CLDN4-201ENST00000340958 TXNL1O43396 289 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 IGKV1-16P04430 117 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 S100A11P31949 105 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 SPNS3Q6ZMD2 512 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 PDPNQ86YL7 162 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 KRTAP1-3Q8IUG1 177 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 OR5AN1Q8NGI8 311 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 TMEM140Q9NV12 185 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 DPM3Q9P2X0 92 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 FLNAP21333 2647 aaKnown RBP14.06□□□□□ -0.16
CLDN4-201ENST00000340958 KANTRA0A1W2PQU2 76 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 PITX3O75364 302 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 LYL1P12980 280 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 HOXB4P17483 251 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-201ENST00000340958 RPS16P62249 146 aaKnown RBP14.06□□□□□ -0.16
CLDN4-201ENST00000340958 ID3Q02535 119 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 OPCMLQ14982 345 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 Q5PR19 223 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 RHOVQ96L33 236 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 HARBI1Q96MB7 349 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 UNKLQ9H9P5 680 aaKnown RBP14.06□□□□□ -0.16
CLDN4-201ENST00000340958 COA4Q9NYJ1 87 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 POLR3KQ9Y2Y1 108 aaPredicted RBP14.06□□□□□ -0.16
CLDN4-201ENST00000340958 HILPDAQ9Y5L2 63 aa14.06□□□□□ -0.16
CLDN4-201ENST00000340958 IGHV3-72A0A0B4J1Y9 119 aa14.05□□□□□ -0.16
CLDN4-201ENST00000340958 CAV2P51636 162 aa14.05□□□□□ -0.16
CLDN4-201ENST00000340958 ZNF345Q14585 488 aa14.05□□□□□ -0.16
CLDN4-201ENST00000340958 CCDC28AQ8IWP9 274 aa14.05□□□□□ -0.16
CLDN4-201ENST00000340958 OR4C13Q8NGP0 309 aa14.05□□□□□ -0.16
CLDN4-201ENST00000340958 OSR1Q8TAX0 266 aaPredicted RBP14.05□□□□□ -0.16
CLDN4-201ENST00000340958 IGHV1-3A0A0C4DH29 117 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 B4DSR2 109 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 RNASEK-C17orf49H0YIS7 233 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 CHST1O43916 411 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 MSMBP08118 114 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 RPL12P30050 165 aaKnown RBP14.04□□□□□ -0.16
CLDN4-201ENST00000340958 OR2B8PP59922 312 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 TPTE2P1Q5T6R2 138 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 WFDC11Q8NEX6 87 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 RBMXL1Q96E39 390 aaKnown RBP14.04□□□□□ -0.16
CLDN4-201ENST00000340958 MED13LQ71F56 2210 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 RNF222A6NCQ9 220 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 SYNGR2O43760 224 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 MED6O75586 246 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 IFNA17P01571 189 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 OR9G9P0C7N8 305 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 P0C879 139 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 P2RY1P47900 373 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 ARHGDIBP52566 201 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 OR4A47Q6IF82 309 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 HCP5Q6MZN7 132 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 TBX15Q96SF7 602 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 NUP50Q9UKX7 468 aa14.04□□□□□ -0.16
CLDN4-201ENST00000340958 TEP1Q99973 2627 aaKnown RBP14.03□□□□□ -0.16
CLDN4-201ENST00000340958 RPS10-NUDT3A0A1W2PQS6 291 aa14.03□□□□□ -0.16
CLDN4-201ENST00000340958 FAM90A9PA6NNJ1 464 aa14.03□□□□□ -0.16
CLDN4-201ENST00000340958 ODF3BA8MYP8 253 aa14.03□□□□□ -0.16
CLDN4-201ENST00000340958 FAM90A26D6RGX4 464 aa14.03□□□□□ -0.16
CLDN4-201ENST00000340958 GPR137BO60478 399 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms