RNA–Protein interactions for RNA: ENST00000340621.9

CCDC144A-202, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2 BASIC

Gene CCDC144A, Length 2,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-202ENST00000340621 TRAV38-1A0A0B4J264 116 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 FCN3O75636 299 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 CRYBA1P05813 215 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 KIR2DS2P43631 304 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 TMPRSS3P57727 454 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 SPCS3P61009 180 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 TFF3Q07654 80 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ACSM6Q6P461 480 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 DMRTC2Q8IXT2 367 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 OR4S2Q8NH73 311 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 EGLN1Q9GZT9 426 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 SLC25A10Q9UBX3 287 aaPredicted RBP13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 RPUSD1Q9UJJ7 312 aaKnown RBP13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 RAXQ9Y2V3 346 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 TIMM9Q9Y5J7 89 aa13.08□□□□□ -0.32
CCDC144A-202ENST00000340621 DYSFO75923 2080 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 RELNP78509 3460 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 LOC102723971A0A1B0GUV8 181 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 hADV38S2A0JD32 116 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 E7EQL1 145 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 TMEM178BH3BS89 294 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 FGF7P21781 194 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 KHDC3LQ587J8 217 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 RNASE6Q93091 150 aaKnown RBP13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNRD1Q9P1U0 126 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 MLXQ9UH92 298 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 NKX6-3A6NJ46 265 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 ZFP92A6NM28 416 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 VSTM5A8MXK1 200 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 H3BQ15 152 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 GFRA3O60609 400 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 NHLH1Q02575 133 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 ZCCHC14Q8WYQ9 949 aaKnown RBP13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 ISOC2Q96AB3 205 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 NGBQ9NPG2 151 aa13.07□□□□□ -0.32
CCDC144A-202ENST00000340621 PPIAL4EA0A075B759 164 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 PPIAL4DF5H284 164 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 PPIAL4FP0DN26 164 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 CTRB1P17538 263 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 MDKP21741 143 aaPredicted RBP13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 THBS3P49746 956 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 FLI1Q01543 452 aaPredicted RBP13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 RHEBQ15382 184 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 NCMAPQ5T1S8 102 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 CTRB2Q6GPI1 263 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 RHOVQ96L33 236 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 NPCDR1Q9BY65 106 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 UNKLQ9H9P5 680 aaKnown RBP13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 PPIAL4AQ9Y536 164 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 LINC00312Q9Y6C7 94 aa13.06□□□□□ -0.32
CCDC144A-202ENST00000340621 MAP1LC3B2A6NCE7 125 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 RRHO14718 337 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 IFNA10P01566 189 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 VDAC2P45880 294 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 RPL31P62899 125 aaKnown RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 PDLIM3Q53GG5 364 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 SLC25A48Q6ZT89 311 aaKnown RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 C15orf54Q8N8G6 183 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 MAP1LC3BQ9GZQ8 125 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 HEYLQ9NQ87 328 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 SLC39A9Q9NUM3 307 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 TMEM106BQ9NUM4 274 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 DOCK11Q5JSL3 2073 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 RAI1Q7Z5J4 1906 aaPredicted RBP13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 ARG1P05089 322 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 PAX6P26367 422 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 AVPI1Q5T686 147 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNF429Q86V71 674 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 C1orf87Q8N0U7 546 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 ABHD12Q8N2K0 398 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 TUBA4BQ9H853 241 aa13.05□□□□□ -0.32
CCDC144A-202ENST00000340621 TNFRSF13BO14836 293 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 HMGB3O15347 200 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 CT45A6P0DMU7 189 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 CT45A5P0DMU8 189 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 CT45A7P0DMV0 189 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 BCL2P10415 239 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 CCL3L1P16619 93 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 TMEM200BQ69YZ2 307 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 OR4A47Q6IF82 309 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 LYPD2Q6UXB3 125 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 HIST1H2BAQ96A08 127 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 CISD1Q9NZ45 108 aaKnown RBP13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 MEF2CQ06413 473 aaPredicted RBP13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 FFAR4Q5NUL3 377 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 OR10G4Q8NGN3 311 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 OR10G9Q8NGN4 311 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 OR10G7Q8NGN6 311 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 LHX4Q969G2 390 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 RAB39BQ96DA2 213 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 ADTRPQ96IZ2 230 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 TCF19Q9Y242 345 aa13.04□□□□□ -0.32
CCDC144A-202ENST00000340621 A0A1W2PPE2 198 aa13.03□□□□□ -0.32
CCDC144A-202ENST00000340621 CD1BP29016 333 aa13.03□□□□□ -0.32
CCDC144A-202ENST00000340621 ZNF709Q8N972 641 aa13.03□□□□□ -0.32
CCDC144A-202ENST00000340621 LINC01560Q8TB33 94 aa13.03□□□□□ -0.32
CCDC144A-202ENST00000340621 TMEM170AQ8WVE7 144 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms