RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 GTSCR1Q86UQ5 136 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 BAP18Q8IXM2 172 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 ITLN2Q8WWU7 325 aaPredicted RBP10.72□□□□□ -0.69
LIN54-201ENST00000340417 SAMD10Q9BYL1 202 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 PAX5Q02548 391 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 RXFP4Q8TDU9 374 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 GPHA2Q96T91 129 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 SPOCK3Q9BQ16 436 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 AKIP1Q9NQ31 210 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 DOCK9Q9BZ29 2069 aa10.72□□□□□ -0.69
LIN54-201ENST00000340417 C3orf36Q3SXR2 165 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 SNAPINO95295 136 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 IZUMO4Q1ZYL8 232 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 MINOS1Q5TGZ0 78 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 PLPPR1Q8TBJ4 325 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 SLC2A8Q9NY64 477 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 MINOS1-NBL1R4GNA1 71 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 S4R3C0 116 aa10.71□□□□□ -0.69
LIN54-201ENST00000340417 MED12Q93074 2177 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 IGHV2-26A0A0B4J1V2 119 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 OR10J1P30954 320 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 P2RY1P47900 373 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 RPL30P62888 115 aaKnown RBP10.71□□□□□ -0.7
LIN54-201ENST00000340417 TMEM200BQ69YZ2 307 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 OR4A47Q6IF82 309 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 RCC2Q9P258 522 aaKnown RBP10.71□□□□□ -0.7
LIN54-201ENST00000340417 FAM181BA6NEQ2 426 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 ADORA2A-AS1P86434 159 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 OXA1LQ15070 435 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 IL17RELQ6ZVW7 336 aa10.71□□□□□ -0.7
LIN54-201ENST00000340417 ZNF90Q03938 601 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 COL4A3Q01955 1670 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 HELTA6NFD8 242 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 CGB1A6NKQ9 187 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 ORM1P02763 201 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 TNFRSF14Q92956 283 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 SMIM7Q9BQ49 75 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 NPVFQ9HCQ7 196 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 PLXNA2O75051 1894 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 PJVKQ0ZLH3 352 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 TMEM78Q5T7P6 136 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 MAP1LC3B2A6NCE7 125 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 INHBBP09529 407 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 SELLP14151 372 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 TMEM255AQ5JRV8 349 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 PRSS54Q6PEW0 395 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 SCARB1Q8WTV0 552 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 MAP1LC3BQ9GZQ8 125 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 GPR183P32249 361 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 SULT1A1P50225 295 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 RAB5BP61020 215 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 FAM103A1Q9BTL3 118 aaKnown RBP10.7□□□□□ -0.7
LIN54-201ENST00000340417 ZNF430Q9H8G1 570 aaPredicted RBP10.7□□□□□ -0.7
LIN54-201ENST00000340417 LINC00527Q9UJ94 153 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 KIF26BQ2KJY2 2108 aa10.7□□□□□ -0.7
LIN54-201ENST00000340417 IGHV3OR16-13A0A075B7E8 117 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 IGHV3-74A0A0B4J1X5 117 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 J3QLI3 93 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 ZNF207O43670 478 aaKnown RBP10.69□□□□□ -0.7
LIN54-201ENST00000340417 SELENOTP62341 195 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 UNC119Q13432 240 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 ZNF146Q15072 292 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 GPR61Q9BZJ8 451 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 TMEM222Q9H0R3 208 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 MMP26Q9NRE1 261 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 S100A8P05109 93 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 SUN5Q8TC36 379 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 PCNPQ8WW12 178 aaKnown RBP10.69□□□□□ -0.7
LIN54-201ENST00000340417 RBKSQ9H477 322 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 BCL2L11O43521 198 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 SAP30O75446 220 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 ALX3O95076 343 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 MPC2O95563 127 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 IGHV1-8P0DP01 117 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 CD37P11049 281 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 ERVFC1-1P60608 527 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 CFDP00746 253 aaPredicted RBP10.69□□□□□ -0.7
LIN54-201ENST00000340417 TCF19Q9Y242 345 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 LINC00869P0C866 280 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 CD1BP29016 333 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 UFC1Q9Y3C8 167 aa10.69□□□□□ -0.7
LIN54-201ENST00000340417 MSGN1A6NI15 193 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 IGKV3-20P01619 116 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 ZNF818PQ6ZRF7 136 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 TRAF4Q9BUZ4 470 aaPredicted RBP10.68□□□□□ -0.7
LIN54-201ENST00000340417 TM2D1Q9BX74 207 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 SAA2-SAA4A0A096LPE2 208 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 IGHV3-49A0A0A0MS15 119 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 SAA2P0DJI9 122 aaPredicted RBP10.68□□□□□ -0.7
LIN54-201ENST00000340417 LYPD2Q6UXB3 125 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 RAB9AP51151 201 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 DLX6P56179 175 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 MARC2Q969Z3 335 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 SPRY4Q9C004 299 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 YPEL1O60688 119 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 TSPOP30536 169 aa10.68□□□□□ -0.7
LIN54-201ENST00000340417 GNG4P50150 75 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms