RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 DFFBO76075 338 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 OR8U8P0C7N1 319 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SEC11BP0C7V7 166 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PINX1Q96BK5 328 aaKnown RBP8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 TMPRSS5Q9H3S3 457 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SLC35D1Q9NTN3 355 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 CCDC168Q8NDH2 2452 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IGHV3-21A0A0B4J1V1 117 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IGHV1-69-2A0A0G2JMI3 117 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PROP1O75360 226 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IGKV1-16P04430 117 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 ARG1P05089 322 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 TUBG1P23258 451 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 CDKN1AP38936 164 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 BRWD1-AS2P59051 145 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 STUMQ69YW2 141 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF787Q6DD87 383 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 OR10Z1Q8NGY1 313 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SAT2Q96F10 170 aaPredicted RBP8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SMIM8Q96KF7 97 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 GINS3Q9BRX5 216 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IFI27L2Q9H2X8 130 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PATZ1Q9HBE1 687 aaKnown RBP8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 TUBG2Q9NRH3 451 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 RPRMQ9NS64 109 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB19A4D1S5 217 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 CHRNB4P30926 498 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 CLEC12BQ2HXU8 276 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 C17orf58Q2M2W7 97 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 GCSAMLQ5JQS6 135 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IL34Q6ZMJ4 242 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 HAPLN4Q86UW8 402 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 ODF3L1Q8IXM7 274 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF714Q96N38 554 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PBDC1Q9BVG4 233 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 LPAR2Q9HBW0 351 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PARP11Q9NR21 331 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SIRT7Q9NRC8 400 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 JPT1Q9UK76 154 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 PEA15Q15121 130 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SMUG1Q53HV7 270 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SOHLH1Q5JUK2 328 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 AGMATQ9BSE5 352 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 SLC39A9Q9NUM3 307 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 IDI2-AS1Q9NZ38 188 aa8.39□□□□□ -1.07
RBFOX1-202ENST00000340209 DUXBA0A1W2PPF3 345 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 ACTL6BO94805 426 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 CD24P25063 80 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 UCNP55089 124 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 FFAR4Q5NUL3 377 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 BTNL8Q6UX41 500 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF295-AS1Q8N0V1 137 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 LHX4Q969G2 390 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 IL22RA2Q969J5 263 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 LSM10Q969L4 123 aaKnown RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 GNPNAT1Q96EK6 184 aaPredicted RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 MRPL20Q9BYC9 149 aaKnown RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 MLXQ9UH92 298 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 SHISA9B4DS77 424 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 REG1AP05451 166 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 HIPK2Q9H2X6 1198 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 CRYBG3Q68DQ2 2970 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 RAI1Q7Z5J4 1906 aaPredicted RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 RAB29O14966 203 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 SNAPINO95295 136 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 ACAA1P09110 424 aaPredicted RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 DVL1P1P54792 670 aaPredicted RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF525Q8N782 197 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 OR4S2Q8NH73 311 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 HARBI1Q96MB7 349 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 MS4A5Q9H3V2 200 aa8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 AURKAIP1Q9NWT8 199 aaPredicted RBP8.38□□□□□ -1.07
RBFOX1-202ENST00000340209 IGSF10Q6WRI0 2623 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 NPIPB11E5RHQ5 1161 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 NQO2P16083 231 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 SNCAP37840 140 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 LOXL3P58215 753 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 C10orf55Q5SWW7 151 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF788Q6ZQV5 615 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 C1orf174Q8IYL3 243 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 FAM169BQ8N8A8 192 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 MED9Q9NWA0 146 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 TMEM178BH3BS89 294 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 NDUFS7O75251 213 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 HNF1AP20823 631 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 CA7P43166 264 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 TAS2R30P59541 319 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 TLE4Q04727 773 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 AWAT1Q58HT5 328 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 TMEM200BQ69YZ2 307 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 TRAT1Q6PIZ9 186 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 CYB561D1Q8N8Q1 229 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 ZNF383Q8NA42 475 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 Q8TCH9 128 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 RPUSD4Q96CM3 377 aaKnown RBP8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 RRHO14718 337 aa8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 APOBEC3AP31941 199 aaPredicted RBP8.37□□□□□ -1.07
RBFOX1-202ENST00000340209 PDLIM3Q53GG5 364 aaPredicted RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms