RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 AADACL3Q5VUY0 350 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 LCNL1Q6ZST4 164 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 VKORC1L1Q8N0U8 176 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 SPAG16Q8N0X2 631 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 TEX45Q8NA69 505 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 OR51H1Q8NH63 302 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 FAM110DQ8TAY7 271 aaPredicted RBP11.95□□□□□ -0.5
UBE3B-201ENST00000340074 FBN3Q75N90 2809 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 MGAM2Q2M2H8 2515 aa11.95□□□□□ -0.5
UBE3B-201ENST00000340074 GPR31O00270 319 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 GSTZ1O43708 216 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 PGLYRP1O75594 196 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 RAB3DO95716 219 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 IGHG4P01861 327 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 RLN1P04808 185 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 SAA1P0DJI8 122 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 PPIFP30405 207 aaKnown RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 FXYD3Q14802 87 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 PHLDA2Q53GA4 152 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 CMTM1Q8IZ96 169 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 ARRDC1Q8N5I2 433 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 ARPC1AQ92747 370 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 R3HDM4Q96D70 268 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 V9GYH0 126 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 CNIH1O95406 144 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 RPLP1P05386 114 aaKnown RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 PSMB8P28062 276 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 CRIP2P52943 208 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 UCP3P55916 312 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 RPL23AP62750 156 aaKnown RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 FOXE3Q13461 319 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 C19orf54Q5BKX5 351 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 CXorf66Q5JRM2 361 aaPredicted RBP11.94□□□□□ -0.5
UBE3B-201ENST00000340074 FAAP20Q6NZ36 180 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 LPCAT3Q6P1A2 487 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 LHFPL1Q86WI0 220 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 OR4F17Q8NGA8 305 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 GRPEL2Q8TAA5 225 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 OR4F4Q96R69 305 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 RSRP1Q9BUV0 290 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 NUBP2Q9Y5Y2 271 aa11.94□□□□□ -0.5
UBE3B-201ENST00000340074 A0A1W2PN81 502 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 RBFOX2O43251 390 aaKnown RBP eCLIP11.93□□□□□ -0.5
UBE3B-201ENST00000340074 HRASP01112 189 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 ELANEP08246 267 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 CHRNA7P36544 502 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 TMEM267Q0VDI3 215 aaPredicted RBP11.93□□□□□ -0.5
UBE3B-201ENST00000340074 ZNF79Q15937 498 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 PRSS8Q16651 343 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 C18orf65Q6ZTR6 163 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 SSX9Q7RTT3 188 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 CCDC190Q86UF4 302 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 SLC38A6Q8IZM9 456 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 RNF152Q8N8N0 203 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 POC5Q8NA72 575 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 MINDY2Q8NBR6 621 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 LFNGQ8NES3 379 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 ZFP57Q9NU63 452 aa11.93□□□□□ -0.5
UBE3B-201ENST00000340074 ANKRD20A5PA0PJZ0 165 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 SOX15O60248 233 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 HPRT1P00492 218 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 IGLV1-40P01703 118 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 ZNF735P0CB33 412 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 AKAIN1P0CW23 69 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 PF4V1P10720 104 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 PPP5CP53041 499 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 MEF2DQ14814 521 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 TNXAQ16473 311 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 AKIRIN2Q53H80 203 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 PYDC2Q56P42 97 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 UNQ5815/PRO19632Q6UWF5 114 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 CD300LFQ8TDQ1 290 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 RHOVQ96L33 236 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 THAP7Q9BT49 309 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-201ENST00000340074 KLK15Q9H2R5 256 aa11.92□□□□□ -0.5
UBE3B-201ENST00000340074 ZNF430Q9H8G1 570 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-201ENST00000340074 FOXA2Q9Y261 457 aaPredicted RBP11.92□□□□□ -0.5
UBE3B-201ENST00000340074 KBTBD11O94819 623 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 OR2A4O95047 310 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 S1PR2O95136 353 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 PGAM2P15259 253 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 F2RP25116 425 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 S100GP29377 79 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 TMEM65Q6PI78 240 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 MMD2Q8IY49 270 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 PUSL1Q8N0Z8 303 aaKnown RBP11.91□□□□□ -0.5
UBE3B-201ENST00000340074 TCTEX1D1Q8N7M0 179 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 KLHL30-AS1Q8NEE0 82 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 OR4C16Q8NGL9 310 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 OR6Q1Q8NGQ2 317 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 TERB2Q8NHR7 220 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 VSTM2AQ8TAG5 236 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 CASTOR1Q8WTX7 329 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 OR2A7Q96R45 310 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 PLEKHA2Q9HB19 425 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 SLC2A9Q9NRM0 540 aa11.91□□□□□ -0.5
UBE3B-201ENST00000340074 NUDT19A8MXV4 375 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms