RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 FAM157AC9JC47 383 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 FGF8P55075 233 aaPredicted RBP12.67□□□□□ -0.38
MBD1-203ENST00000339998 SPSB3Q6PJ21 355 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 DDB2Q92466 427 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 SEBOXQ9HB31 216 aaPredicted RBP12.67□□□□□ -0.38
MBD1-203ENST00000339998 TMEM140Q9NV12 185 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 COA4Q9NYJ1 87 aa12.67□□□□□ -0.38
MBD1-203ENST00000339998 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
MBD1-203ENST00000339998 hADV38S2A0JD32 116 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 HPRT1P00492 218 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 IFNA5P01569 189 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 TAS2R30P59541 319 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 HAGHQ16775 308 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 MS4A5Q9H3V2 200 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 RPRMQ9NS64 109 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 SRRM4A7MD48 611 aaKnown RBP12.66□□□□□ -0.38
MBD1-203ENST00000339998 VSTM5A8MXK1 200 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 CEBPGP53567 150 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 TMEM14EPQ6UXP3 125 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 ABHD12Q8N2K0 398 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 DIRC2Q96SL1 478 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 C20orf24Q9BUV8 137 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 ZNF729A6NN14 1252 aaPredicted RBP12.66□□□□□ -0.38
MBD1-203ENST00000339998 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
MBD1-203ENST00000339998 CT45A6P0DMU7 189 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 CT45A5P0DMU8 189 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 CT45A7P0DMV0 189 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 C1orf87Q8N0U7 546 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 RHOVQ96L33 236 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 HINT2Q9BX68 163 aa12.66□□□□□ -0.38
MBD1-203ENST00000339998 OR13C7P0DN81 318 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 TFF3Q07654 80 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 AKR1C8PQ5T2L2 129 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 ZNF714Q96N38 554 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 AIFM2Q9BRQ8 373 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 PRELID3BQ9Y3B1 194 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 LINC00312Q9Y6C7 94 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 PMS2P5A8MQ11 134 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 NDUFB3O43676 98 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 H2AFB1P0C5Y9 115 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 LOXP28300 417 aaPredicted RBP12.65□□□□□ -0.38
MBD1-203ENST00000339998 DVL1P1P54792 670 aaPredicted RBP12.65□□□□□ -0.38
MBD1-203ENST00000339998 OR4A16Q8NH70 328 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 SCGB1C1Q8TD33 95 aa12.65□□□□□ -0.38
MBD1-203ENST00000339998 A0A1W2PPR1 153 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 B9A039 149 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 TNFRSF13BO14836 293 aaPredicted RBP12.64□□□□□ -0.39
MBD1-203ENST00000339998 RELBQ01201 579 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 C1QTNF12Q5T7M4 302 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 IGFBPL1Q8WX77 278 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 MYO18BQ8IUG5 2567 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 RRHO14718 337 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 DFFBO76075 338 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 IGKV1D-33P01593 117 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 IGKV1-33P01594 117 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 ZNF726P1Q15940 193 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 OR4A47Q6IF82 309 aa12.64□□□□□ -0.39
MBD1-203ENST00000339998 SLC25A48Q6ZT89 311 aaKnown RBP12.64□□□□□ -0.39
MBD1-203ENST00000339998 STRAPQ9Y3F4 350 aaKnown RBP12.64□□□□□ -0.39
MBD1-203ENST00000339998 USP9XQ93008 2570 aaPredicted RBP12.63□□□□□ -0.39
MBD1-203ENST00000339998 FAM90A26D6RGX4 464 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 NQO2P16083 231 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 RAB7AP51149 207 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 HFEQ30201 348 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 CORO2AQ92828 525 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 MRPL20Q9BYC9 149 aaKnown RBP12.63□□□□□ -0.39
MBD1-203ENST00000339998 WDR61Q9GZS3 305 aaKnown RBP12.63□□□□□ -0.39
MBD1-203ENST00000339998 C15orf62A8K5M9 175 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 HBG1P69891 147 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 HBG2P69892 147 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 LRRC75BQ2VPJ9 315 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 LRRC10Q5BKY1 277 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 GNPNAT1Q96EK6 184 aaPredicted RBP12.63□□□□□ -0.39
MBD1-203ENST00000339998 PRORYQ9H606 182 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 SOD3P08294 240 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
MBD1-203ENST00000339998 TMEM170AQ8WVE7 144 aa12.63□□□□□ -0.39
MBD1-203ENST00000339998 IGHV3-72A0A0B4J1Y9 119 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 IFNA10P01566 189 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 DAOP14920 347 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 RAB2AP61019 212 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 ERVK-16P61578 105 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 FBXL19-AS1Q494R0 122 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 SVBPQ8N300 66 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
MBD1-203ENST00000339998 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 HEYLQ9NQ87 328 aaPredicted RBP12.62□□□□□ -0.39
MBD1-203ENST00000339998 PIGBOS1A0A0B4J2F0 54 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 ATF4P18848 351 aaPredicted RBP12.62□□□□□ -0.39
MBD1-203ENST00000339998 PAX6P26367 422 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 RAB5CP51148 216 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 C10orf91Q5T1B1 145 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 OR4S2Q8NH73 311 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 LAMP3Q9UQV4 416 aa12.62□□□□□ -0.39
MBD1-203ENST00000339998 H7C2Y5 167 aa12.61□□□□□ -0.39
MBD1-203ENST00000339998 EFNB3Q15768 340 aa12.61□□□□□ -0.39
MBD1-203ENST00000339998 ACSM6Q6P461 480 aa12.61□□□□□ -0.39
MBD1-203ENST00000339998 HEPN1Q6WQI6 88 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms