RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 GCGP01275 180 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 PFN1P07737 140 aaKnown RBP11.89□□□□□ -0.51
PCDH8-201ENST00000338862 ADMP35318 185 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 CCL11P51671 97 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 B3GALT5-AS1P59052 145 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 ACY3Q96HD9 319 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 PSMG3Q9BT73 122 aaPredicted RBP11.89□□□□□ -0.51
PCDH8-201ENST00000338862 SNHG12Q9BXW3 62 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 FAM201AQ5SY85 155 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 MBD3L1Q8WWY6 194 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 S1PR3Q99500 378 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 SSBP3Q9BWW4 388 aaPredicted RBP11.89□□□□□ -0.51
PCDH8-201ENST00000338862 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 TDRG1Q3Y452 100 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 OR5AU1Q8NGC0 362 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 POM121L2Q96KW2 1035 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 CIB3Q96Q77 187 aaPredicted RBP11.89□□□□□ -0.51
PCDH8-201ENST00000338862 APC2O95996 2303 aa11.89□□□□□ -0.51
PCDH8-201ENST00000338862 YLPM1P49750 1951 aaKnown RBP11.89□□□□□ -0.51
PCDH8-201ENST00000338862 SPRY3O43610 288 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 LYG1Q8N1E2 194 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 LRRC29Q8WV35 223 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 SPOCK3Q9BQ16 436 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 MRPL18Q9H0U6 180 aaKnown RBP11.88□□□□□ -0.51
PCDH8-201ENST00000338862 METRNQ9UJH8 293 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 LOC102724200A0A096LPH7 203 aaPredicted RBP11.88□□□□□ -0.51
PCDH8-201ENST00000338862 SERF1AO75920 110 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 IGHEP01854 428 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 OR10J1P30954 320 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 GNB1P62873 340 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 RPL31P62899 125 aaKnown RBP11.88□□□□□ -0.51
PCDH8-201ENST00000338862 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 RRHO14718 337 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 PLAUP00749 431 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 MYOD1P15172 320 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 SUMO1P63165 101 aaKnown RBP11.88□□□□□ -0.51
PCDH8-201ENST00000338862 LHFPL4Q7Z7J7 247 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 TMEM170AQ8WVE7 144 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 SFRP2Q96HF1 295 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 PRDM6Q9NQX0 595 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 GOLT1BQ9Y3E0 138 aa11.88□□□□□ -0.51
PCDH8-201ENST00000338862 CA1P00915 261 aaPredicted RBP11.87□□□□□ -0.51
PCDH8-201ENST00000338862 LMO1P25800 156 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 CCKARP32238 428 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 TCTAP57738 103 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 RND1Q92730 232 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 LSM10Q969L4 123 aaKnown RBP11.87□□□□□ -0.51
PCDH8-201ENST00000338862 ZNF586Q9NXT0 402 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 SPATA31B1PQ5VZV4 182 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 DHRS13Q6UX07 377 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 Q6ZN92 141 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 CISD2Q8N5K1 135 aaKnown RBP11.87□□□□□ -0.51
PCDH8-201ENST00000338862 OR13A1Q8NGR1 328 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 OCC1Q8TAD7 63 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 SH3BGRL2Q9UJC5 107 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 SELENOKQ9Y6D0 94 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 CRYBB3P26998 211 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 RND2P52198 227 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 ZFP36L1Q07352 338 aaKnown RBP11.87□□□□□ -0.51
PCDH8-201ENST00000338862 ZNRF1Q8ND25 227 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 BORCS7Q96B45 105 aa11.87□□□□□ -0.51
PCDH8-201ENST00000338862 TMEM250H0YL14 139 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 NEURL1O76050 574 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 SPCS3P61009 180 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 RPL19P84098 196 aaKnown RBP11.86□□□□□ -0.51
PCDH8-201ENST00000338862 TIGITQ495A1 244 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 PQLC2Q6ZP29 291 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 MPV17P39210 176 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 GNG4P50150 75 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 TNFSF10P50591 281 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 ZNF645Q8N7E2 425 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 PCED1AQ9H1Q7 454 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 SEMA5BQ9P283 1151 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 TRAV3A0A0B4J244 114 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A10PA6NDY2 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 B4E171 279 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 MT-CO2P00403 227 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 CD46P15529 392 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 CD82P27701 267 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 TSPAN7P41732 249 aa11.86□□□□□ -0.51
PCDH8-201ENST00000338862 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
PCDH8-201ENST00000338862 RPP30P78346 268 aaKnown RBP11.86□□□□□ -0.51
PCDH8-201ENST00000338862 FOXL2NBQ6ZUU3 175 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms