RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 WDR61Q9GZS3 305 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 EIF5A2Q9GZV4 153 aaKnown RBP13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 MS4A5Q9H3V2 200 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 TMEM140Q9NV12 185 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 NDRG3Q9UGV2 375 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 PRELID3BQ9Y3B1 194 aa13.33□□□□□ -0.28
SCNN1A-202ENST00000338748 AARDQ4LEZ3 155 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 H1FXQ92522 213 aaKnown RBP13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 RAB9BQ9NP90 201 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 IGHV1-69-2A0A0G2JMI3 117 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 B9A039 149 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 EIF3GO75821 320 aaKnown RBP eCLIP13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 RELBQ01201 579 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 SSX7Q7RTT5 188 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 CBLN2Q8IUK8 224 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 COMMD1Q8N668 190 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 RPRMQ9NS64 109 aa13.32□□□□□ -0.28
SCNN1A-202ENST00000338748 C15orf62A8K5M9 175 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 DVL1O14640 695 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 IFNA17P01571 189 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 H2AFB1P0C5Y9 115 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 NQO2P16083 231 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 LOXP28300 417 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 MUC15Q8N387 334 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 OR4S2Q8NH73 311 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 SCGB1C1Q8TD33 95 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 ZNF714Q96N38 554 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 IGKV1-16P04430 117 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 ZNF726P1Q15940 193 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 CA5BP1Q8WTZ4 195 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 SFT2D1Q8WV19 159 aa13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 TAF15Q92804 592 aaKnown RBP eCLIP13.31□□□□□ -0.28
SCNN1A-202ENST00000338748 MALRD1Q5VYJ5 2156 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 CFAP46Q8IYW2 2715 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 CT45A6P0DMU7 189 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 CT45A5P0DMU8 189 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 CT45A7P0DMV0 189 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 MYOD1P15172 320 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 MEF2CQ06413 473 aaPredicted RBP13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 ETV3LQ6ZN32 361 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 OR4A16Q8NH70 328 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 RHOVQ96L33 236 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 GAL3ST2Q9H3Q3 398 aa13.3□□□□□ -0.28
SCNN1A-202ENST00000338748 THBS3P49746 956 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 ELLP55199 621 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 ERVK-16P61578 105 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 TFF3Q07654 80 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 UNQ6494/PRO21346Q6UXR6 183 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 HEPN1Q6WQI6 88 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 NDUFB3O43676 98 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 IGKV1D-33P01593 117 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 IGKV1-33P01594 117 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 ARG1P05089 322 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 KIR2DS2P43631 304 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 ZNF672Q499Z4 452 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 OR4A47Q6IF82 309 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 CIB3Q96Q77 187 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 AIFM2Q9BRQ8 373 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 PSMG3Q9BT73 122 aaPredicted RBP13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 PRORYQ9H606 182 aa13.29□□□□□ -0.28
SCNN1A-202ENST00000338748 FAM90A9PA6NNJ1 464 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 COL8A2P25067 703 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 PEA15Q15121 130 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 HAGHQ16775 308 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 LRRC10Q5BKY1 277 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 LFNGQ8NES3 379 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 TMEM170AQ8WVE7 144 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 SRRM4A7MD48 611 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 LY6HO94772 140 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 SNAPINO95295 136 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 VDAC2P45880 294 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 DLX1P56177 255 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 SPCS3P61009 180 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 DIAPH2-AS1Q14236 149 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 OR10P1Q8NGE3 313 aa13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 RCC1LQ96I51 464 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 MRPL20Q9BYC9 149 aaKnown RBP13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
SCNN1A-202ENST00000338748 CSMD1Q96PZ7 3565 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 C15orf61A6NNL5 157 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 OR8U8P0C7N1 319 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 DAOP14920 347 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 REG1BP48304 166 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 DLX6P56179 175 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 TMEM30BQ3MIR4 351 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 ACSM6Q6P461 480 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 TMEM147Q9BVK8 224 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 KIAA1456Q9P272 454 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 KAAG1Q9UBP8 84 aa13.27□□□□□ -0.28
SCNN1A-202ENST00000338748 RBFOX3A6NFN3 312 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 RRHO14718 337 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 OR13C7P0DN81 318 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 TLE4Q04727 773 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 HFEQ30201 348 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 ZNF833PQ6ZTB9 187 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 CLRN3Q8NCR9 226 aa13.27□□□□□ -0.29
SCNN1A-202ENST00000338748 TMEM204Q9BSN7 226 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms