RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 LRTM2Q8N967 370 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 OR4X2Q8NGF9 303 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 WISP3O95389 354 aaPredicted RBP10.55□□□□□ -0.72
FN1-202ENST00000336916 OR10J1P30954 320 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 HSPE1P61604 102 aaKnown RBP10.55□□□□□ -0.72
FN1-202ENST00000336916 DLK1P80370 383 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 DUX5Q96PT3 197 aa10.55□□□□□ -0.72
FN1-202ENST00000336916 ABHD12Q8N2K0 398 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 ZIC4Q8N9L1 334 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
FN1-202ENST00000336916 PLSCR3Q9NRY6 295 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 C1QL3Q5VWW1 255 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 FAM159AQ6UWV7 190 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 REC114Q7Z4M0 266 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 DTX2Q86UW9 622 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 LDLRAD3Q86YD5 345 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
FN1-202ENST00000336916 NKX2-8O15522 239 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 MEF2BQ02080 365 aaPredicted RBP10.54□□□□□ -0.72
FN1-202ENST00000336916 TIMP4Q99727 224 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 TTRP02766 147 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 PMCHL1Q16048 86 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 OSR1Q8TAX0 266 aaPredicted RBP10.54□□□□□ -0.72
FN1-202ENST00000336916 CHODLQ9H9P2 273 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 IGKV1-8A0A0C4DH67 115 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 SMIM10L1P0DMW3 83 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 PAX1P15863 534 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 FAM57AQ8TBR7 257 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 SMIM10Q96HG1 83 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 PRELID3AQ96N28 172 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 ZNF256Q9Y2P7 627 aaPredicted RBP10.54□□□□□ -0.72
FN1-202ENST00000336916 CSPG4Q6UVK1 2322 aa10.54□□□□□ -0.72
FN1-202ENST00000336916 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 GDF15Q99988 308 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 SONP18583 2426 aaKnown RBP10.53□□□□□ -0.72
FN1-202ENST00000336916 TRAV8-7A0A075B6U6 113 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 RPS11P62280 158 aaKnown RBP eCLIP10.53□□□□□ -0.72
FN1-202ENST00000336916 SLC25A53Q5H9E4 307 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 ALPK3Q96L96 1907 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 OTOGLQ3ZCN5 2332 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 IRF3Q14653 427 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 PCOLCEQ15113 449 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 C12orf54Q6X4T0 127 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 OR10AC1Q8NH08 325 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 ZNF205O95201 554 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 CTHRC1Q96CG8 243 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 SNURFLB1AK76 121 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 DNAL4O96015 105 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 FCARP24071 287 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 TNFRSF9Q07011 255 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 IBA57Q5T440 356 aaKnown RBP10.53□□□□□ -0.72
FN1-202ENST00000336916 MRPL24Q96A35 216 aaKnown RBP10.53□□□□□ -0.72
FN1-202ENST00000336916 RAB37Q96AX2 223 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 PMCHL2Q9BQD1 86 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 ASIPP42127 132 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 ADIPOQQ15848 244 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 LYZL2Q7Z4W2 148 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 OR10D4PQ8NGN7 298 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 RCC2Q9P258 522 aaKnown RBP10.53□□□□□ -0.72
FN1-202ENST00000336916 TUBD1Q9UJT1 453 aa10.53□□□□□ -0.72
FN1-202ENST00000336916 A0A1B0GW15 77 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 GPX1P07203 203 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 FDCSPQ8NFU4 85 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 OR10AG1Q8NH19 301 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.72
FN1-202ENST00000336916 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 KCNK7Q9Y2U2 307 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 NUP210LQ5VU65 1888 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 C7orf66A4D0T2 115 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 CA7P43166 264 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 CDX1P47902 265 aaPredicted RBP10.52□□□□□ -0.72
FN1-202ENST00000336916 Q6AWC8 147 aa10.52□□□□□ -0.72
FN1-202ENST00000336916 TMEM140Q9NV12 185 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 A0A1W2PRD5 423 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 A0A1W2PRF3 423 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 A0A1W2PRM7 423 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 MFAP2P55001 183 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 SPSB4Q96A44 273 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 SGK494Q96LW2 274 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 TRBV5-5A0A0J9YX44 114 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 SPINK4O60575 86 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 RBFOX2O43251 390 aaKnown RBP eCLIP10.52□□□□□ -0.731e-8■■■■■ 27.7
FN1-202ENST00000336916 PRSS2P07478 247 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 C1orf100Q5SVJ3 147 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 LEMD1Q68G75 181 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 WFDC3Q8IUB2 231 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 AQP3Q92482 292 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 SMIM8Q96KF7 97 aa10.52□□□□□ -0.73
FN1-202ENST00000336916 OR4D11Q8NGI4 311 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 HSPB1P04792 205 aaKnown RBP10.51□□□□□ -0.73
FN1-202ENST00000336916 C8orf88P0DMB2 117 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 REG1BP48304 166 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 C11orf91Q3C1V1 193 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 FAM24BQ8N5W8 94 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 NUDT10Q8NFP7 164 aa10.51□□□□□ -0.73
FN1-202ENST00000336916 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms