RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 SRRM4A7MD48 611 aaKnown RBP8.68□□□□□ -1.02
C9orf85-201ENST00000334731 ARPC1BO15143 372 aaKnown RBP8.68□□□□□ -1.02
C9orf85-201ENST00000334731 SLC25A17O43808 307 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 AIREO43918 545 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CCNKO75909 580 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CA2P00918 260 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 IGLV2-23P01705 113 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CRYGBP07316 175 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 LGALS7P47929 136 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 FXYD3Q14802 87 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 ARL6IP1Q15041 203 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CDK10Q15131 360 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 ZNF260Q3ZCT1 412 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 UNQ5815/PRO19632Q6UWF5 114 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 H1FOOQ8IZA3 346 aaPredicted RBP8.68□□□□□ -1.02
C9orf85-201ENST00000334731 MS4A10Q96PG2 267 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 B9D2Q9BPU9 175 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 GINS4Q9BRT9 223 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CENPOQ9BU64 300 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 ALX4Q9H161 411 aaPredicted RBP8.68□□□□□ -1.02
C9orf85-201ENST00000334731 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.68□□□□□ -1.02
C9orf85-201ENST00000334731 SSR3Q9UNL2 185 aa8.68□□□□□ -1.02
C9orf85-201ENST00000334731 CRYZL1O95825 349 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 DTYMKP23919 212 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 ECI1P42126 302 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 SSBP2P81877 361 aaPredicted RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 TAGLNQ01995 201 aaKnown RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 PJVKQ0ZLH3 352 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 TMEM177Q53S58 311 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 VAX1Q5SQQ9 334 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 HACD4Q5VWC8 232 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 PYHIN1Q6K0P9 492 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 SFXN4Q6P4A7 337 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 BVESQ8NE79 360 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 DCUN1D4Q92564 292 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 ARPC1AQ92747 370 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 ST6GALNAC5Q9BVH7 336 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 SLIRPQ9GZT3 109 aaKnown RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 OR51E2Q9H255 320 aa8.67□□□□□ -1.02
C9orf85-201ENST00000334731 LSM4Q9Y4Z0 139 aaKnown RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 RBM7Q9Y580 266 aaKnown RBP8.67□□□□□ -1.02
C9orf85-201ENST00000334731 CENPXA8MT69 81 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 LINC01619G3V211 115 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 OVOL1O14753 267 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 CNIH1O95406 144 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 IGHV3-11P01762 117 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 CLEC2LP0C7M8 214 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 CD36P16671 472 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 DUTP33316 252 aaKnown RBP8.66□□□□□ -1.02
C9orf85-201ENST00000334731 SDC2P34741 201 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 ETV6P41212 452 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 INSL3P51460 131 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 TNP2Q05952 138 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 CD69Q07108 199 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 RTL8BQ17RB0 113 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 ZFP69Q49AA0 526 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 C11orf87Q6NUJ2 197 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 OR5T1Q8NG75 326 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 DDB2Q92466 427 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
C9orf85-201ENST00000334731 RHOVQ96L33 236 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 PRR25Q96S07 402 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 NXF2Q9GZY0 626 aaKnown RBP8.66□□□□□ -1.02
C9orf85-201ENST00000334731 DCSTAMPQ9H295 470 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 RNF167Q9H6Y7 350 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 PRELID1Q9Y255 219 aa8.66□□□□□ -1.02
C9orf85-201ENST00000334731 IGHV4OR15-8A0A075B7B6 117 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 A0A087WW49 117 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 TMEM235A6NFC5 223 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 LINC00473A8K010 186 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 SHOXO15266 292 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 HSPB1P04792 205 aaKnown RBP8.65□□□□□ -1.02
C9orf85-201ENST00000334731 CTXN2P0C2S0 81 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 RRASP10301 218 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 SLURP1P55000 103 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 TPPP2P59282 170 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 PITPNAQ00169 270 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 ZNF429Q86V71 674 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 OR6F1Q8NGZ6 308 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 LGALS14Q8TCE9 139 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 NUDCD2Q8WVJ2 157 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 AP3S1Q92572 193 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 ADTRPQ96IZ2 230 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 HARBI1Q96MB7 349 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
C9orf85-201ENST00000334731 OR2W1Q9Y3N9 320 aa8.65□□□□□ -1.02
C9orf85-201ENST00000334731 LOC105371267A0A1B0GV96 52 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 SSX5O60225 188 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 SCGNO76038 276 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 HLA-DQB1P01920 261 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 TRGV3P03979 118 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 NFYAP23511 347 aaPredicted RBP8.64□□□□□ -1.03
C9orf85-201ENST00000334731 VBP1P61758 197 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 MXD1Q05195 221 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 CNIH2Q6PI25 160 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 TEX45Q8NA69 505 aa8.64□□□□□ -1.03
C9orf85-201ENST00000334731 OR5H6Q8NGV6 325 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms