RNA–Protein interactions for RNA: ENST00000333617.8

LSAMP-201, Transcript of limbic system associated membrane protein, humanhuman

TSL 2

Gene LSAMP, Length 1,561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-201ENST00000333617 TMEM106BQ9NUM4 274 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 UQCC1Q9NVA1 299 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 FAM96BQ9Y3D0 163 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 LINC00312Q9Y6C7 94 aa7.17□□□□□ -1.26
LSAMP-201ENST00000333617 FAM90A9PA6NNJ1 464 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RNASEK-C17orf49H0YIS7 233 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RBFOX2O43251 390 aaKnown RBP eCLIP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RBMXL2O75526 392 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SFTPCP11686 197 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 FHITP49789 147 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 DVL1P1P54792 670 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ERVK-16P61578 105 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 MEF2CQ06413 473 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 C10orf91Q5T1B1 145 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 TMEM14EPQ6UXP3 125 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 LILRB2Q8N423 598 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF525Q8N782 197 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 OR10A7Q8NGE5 316 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SCGB1C1Q8TD33 95 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 GAL3ST2Q9H3Q3 398 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 CISD1Q9NZ45 108 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RFNGQ9Y644 331 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 PLXNB1O43157 2135 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ARHGAP32A7KAX9 2087 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SAA2-SAA4A0A096LPE2 208 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 A0A1W2PPE3 182 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 NDUFB3O43676 98 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 PLAUP00749 431 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 CD5P06127 495 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SAA2P0DJI9 122 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 NQO2P16083 231 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ADCYAP1P18509 176 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SNCAP37840 140 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 THBS3P49746 956 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ARHGDIBP52566 201 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 MRPS11P82912 194 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ADORA2A-AS1P86434 159 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RUNX1Q01196 453 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ARL16Q0P5N6 197 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 BTN1A1Q13410 526 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 LRRC10Q5BKY1 277 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 UTF1Q5T230 341 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 AKR1C8PQ5T2L2 129 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 PRAMEF5Q5TYX0 476 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 THNSL2Q86YJ6 484 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 LYG1Q8N1E2 194 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SVBPQ8N300 66 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ZNF439Q8NDP4 499 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 LFNGQ8NES3 379 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 OR4S2Q8NH73 311 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 DTD1Q8TEA8 209 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 CA5BP1Q8WTZ4 195 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ZCCHC14Q8WYQ9 949 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 ADTRPQ96IZ2 230 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 CIB3Q96Q77 187 aaPredicted RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 SEC11CQ9BY50 192 aa7.16□□□□□ -1.26
LSAMP-201ENST00000333617 RPUSD1Q9UJJ7 312 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 CARHSP1Q9Y2V2 147 aaKnown RBP7.16□□□□□ -1.26
LSAMP-201ENST00000333617 WNK2Q9Y3S1 2297 aa7.15□□□□□ -1.26
LSAMP-201ENST00000333617 IGHV1-69-2A0A0G2JMI3 117 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 MED19A0JLT2 244 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-201ENST00000333617 CEBPZOSA8MTT3 80 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 TNFRSF13BO14836 293 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-201ENST00000333617 MMP23AO75900 390 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 SFTA3P0C7M3 94 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 OR9G9P0C7N8 305 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 DAOP14920 347 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 GNG10P50151 68 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 RPL31P62899 125 aaKnown RBP7.15□□□□□ -1.27
LSAMP-201ENST00000333617 SLC38A11Q08AI6 406 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 ZNF273Q14593 569 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 PEA15Q15121 130 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 OR8G2PQ6IF36 304 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 ATRAIDQ6UW56 229 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 LYPD2Q6UXB3 125 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 UNQ6494/PRO21346Q6UXR6 183 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 DPPA3Q6W0C5 159 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 SLC25A48Q6ZT89 311 aaKnown RBP7.15□□□□□ -1.27
LSAMP-201ENST00000333617 SSX9Q7RTT3 188 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 HAPLN4Q86UW8 402 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 MUC15Q8N387 334 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 OR4A16Q8NH70 328 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 DDB2Q92466 427 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 OR4C12Q96R67 309 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 NKX6-2Q9C056 277 aaPredicted RBP7.15□□□□□ -1.27
LSAMP-201ENST00000333617 PRORYQ9H606 182 aa7.15□□□□□ -1.27
LSAMP-201ENST00000333617 NAV3Q8IVL0 2385 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 H3BS24 57 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 NDUFA2O43678 99 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 ZG16O60844 167 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 LY86O95711 162 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 IFNA17P01571 189 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 OR8U8P0C7N1 319 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 OR2B8PP59922 312 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 TLE4Q04727 773 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 GUK1Q16774 197 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 ATP6V1FQ16864 119 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 LRRC75BQ2VPJ9 315 aa7.14□□□□□ -1.27
LSAMP-201ENST00000333617 HFEQ30201 348 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms