RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 FOXS1O43638 330 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 PITX3O75364 302 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 NDUFA3O95167 84 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 CD1AP06126 327 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 TTC32Q5I0X7 151 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ZNF324BQ6AW86 544 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 SSBP3Q9BWW4 388 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 NPFFR1Q9GZQ6 430 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 COL22A1Q8NFW1 1626 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 IL4P05112 153 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 DMKNQ6E0U4 476 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 LHFPL4Q7Z7J7 247 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 BEND2Q8NDZ0 799 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 RHOVQ96L33 236 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 NANOS3P60323 173 aaKnown RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 GFI1BQ5VTD9 330 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 UBE2DNLQ8IWF7 75 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 PARLQ9H300 379 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 A0A1W2PQD3 144 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 C7orf77A4D0Y5 90 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 AHRRA9YTQ3 701 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 EGR1P18146 543 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 CRYBB3P26998 211 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 PLP1P60201 277 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 BHLHA9Q7RTU4 235 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 FAM168AQ92567 244 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 IFT22Q9H7X7 185 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ST6GALNAC2Q9UJ37 374 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ZNF236Q9UL36 1845 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 TAF1LQ8IZX4 1826 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 K7ERU9 68 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 OGG1O15527 345 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ZG16O60844 167 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 S1PR2O95136 353 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ZP4Q12836 540 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 RPL39P5Q59GN2 51 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ERASQ7Z444 233 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 ZNF501Q96CX3 271 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 QTRT1Q9BXR0 403 aaKnown RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 TUBD1Q9UJT1 453 aa9.07□□□□□ -0.96
CLN8-201ENST00000331222 FOXA2Q9Y261 457 aaPredicted RBP9.07□□□□□ -0.96
CLN8-201ENST00000331222 TET1Q8NFU7 2136 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 SFTA2Q6UW10 78 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 SPAG8Q99932 426 aaPredicted RBP9.06□□□□□ -0.96
CLN8-201ENST00000331222 TRBV20OR9-2A0A075B6H5 130 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 TMEM238LA0A1B0GVL6 79 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 A6NJY4 79 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
CLN8-201ENST00000331222 LINC00305Q7Z4B0 112 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 RBBP6Q7Z6E9 1792 aaKnown RBP9.06□□□□□ -0.96
CLN8-201ENST00000331222 TNFRSF18Q9Y5U5 241 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 CTXND1A0A1B0GTU2 59 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 CDX1P47902 265 aaPredicted RBP9.06□□□□□ -0.96
CLN8-201ENST00000331222 LINC00596Q86U02 117 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 STPG3Q8N7X2 389 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 MRPL18Q9H0U6 180 aaKnown RBP9.06□□□□□ -0.96
CLN8-201ENST00000331222 CXorf51AA0A1B0GTR3 108 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 A8MWL6 223 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 GPR183P32249 361 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 STHQ8IWL8 128 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 SFRP2Q96HF1 295 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 ABCA1O95477 2261 aa9.06□□□□□ -0.96
CLN8-201ENST00000331222 DSPPQ9NZW4 1301 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 GRIFINA4D1Z8 144 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 FGF12P61328 243 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 BSPH1Q075Z2 132 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 OR5AN1Q8NGI8 311 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 C7orf69Q9H7B7 122 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 TIAF1O95411 115 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 PNRC1Q12796 327 aaPredicted RBP9.05□□□□□ -0.96
CLN8-201ENST00000331222 RNASEH2CQ8TDP1 164 aaKnown RBP9.05□□□□□ -0.96
CLN8-201ENST00000331222 WNT10AQ9GZT5 417 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 PILRBQ9UKJ0 227 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 NHSL1Q5SYE7 1610 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 SOD3P08294 240 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 FGF9P31371 208 aaPredicted RBP9.05□□□□□ -0.96
CLN8-201ENST00000331222 WDR54Q9H977 334 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 LIPFP07098 398 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 ICAM4Q14773 271 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 FGFRL1Q8N441 504 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 OR1P1Q8NH06 330 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 GALNT14Q96FL9 552 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 SIGLEC12Q96PQ1 595 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 GAGE10A6NGK3 116 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 TRGC2P03986 189 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 TFF1P04155 84 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 NPC2P61916 151 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 WDR82Q6UXN9 313 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 SPSB4Q96A44 273 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 TRAF4Q9BUZ4 470 aaPredicted RBP9.05□□□□□ -0.96
CLN8-201ENST00000331222 FBXL15Q9H469 300 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 BRWD3Q6RI45 1802 aa9.05□□□□□ -0.96
CLN8-201ENST00000331222 IGHV3-64A0A075B6Q5 118 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 TGIF2-C20orf24A0A0A6YYL0 155 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 A0A0U1RRA0 63 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 CELA3AP09093 270 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 MC5RP33032 325 aa9.04□□□□□ -0.96
CLN8-201ENST00000331222 ZNF506Q5JVG8 444 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms