RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 GCSAMLQ5JQS6 135 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 OR4F17Q8NGA8 305 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 ZFAND5O76080 213 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 RHOBP62745 196 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 LRRC10Q5BKY1 277 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 RAET1LQ5VY80 246 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 ATOH7Q8N100 152 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 TRIOBPQ9H2D6 2365 aa20.41■□□□□ 0.86
SOX1-201ENST00000330949 TRAV9-2A0A087WT02 112 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 C9JCJ5 164 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 CELA2AP08217 269 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 ARL14EPLP0DKL9 152 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 GLB1P16278 677 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 PI4KAP42356 2102 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 TMEM204Q9BSN7 226 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 SEPSECSQ9HD40 501 aaKnown RBP20.4■□□□□ 0.86
SOX1-201ENST00000330949 CXorf1O96002 111 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 PCBD1P61457 104 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 VASH2Q86V25 355 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 Q8N7P7 452 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 CPT1CQ8TCG5 803 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 SPACA9Q96E40 222 aaPredicted RBP20.4■□□□□ 0.86
SOX1-201ENST00000330949 ZG16O60844 167 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 SCRG1O75711 98 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 OR4P4Q8NGL7 312 aa20.4■□□□□ 0.86
SOX1-201ENST00000330949 SIRPB1O00241 398 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 SRD5A2P31213 254 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 CX3CL1P78423 397 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 OR2M7Q8NG81 312 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 WDR83OSQ9Y284 106 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 V9GYV3 84 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 DIDO1Q9BTC0 2240 aaKnown RBP20.39■□□□□ 0.85
SOX1-201ENST00000330949 EDDM3BP56851 147 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 RPL31P62899 125 aaKnown RBP20.39■□□□□ 0.85
SOX1-201ENST00000330949 MAJINQ3KP22 176 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 TMEM136Q6ZRR5 245 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 DRAM1Q8N682 238 aa20.39■□□□□ 0.85
SOX1-201ENST00000330949 STAG3L2P0CL84 134 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 STAG3L3P0CL85 134 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 RPS16P62249 146 aaKnown RBP20.38■□□□□ 0.85
SOX1-201ENST00000330949 CEACAM21Q3KPI0 293 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 KIAA1644Q3SXP7 199 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 TMPRSS7Q7RTY8 843 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 TSKUQ8WUA8 353 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 C1QTNF5Q9BXJ0 243 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 ODAMA1E959 279 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 SRIP30626 198 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 FAM58AQ8N1B3 248 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 CLEC7AQ9BXN2 247 aa20.38■□□□□ 0.85
SOX1-201ENST00000330949 TRAV24A0A0B4J272 114 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 EAF1Q96JC9 268 aaPredicted RBP20.37■□□□□ 0.85
SOX1-201ENST00000330949 PRDM14Q9GZV8 571 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 FGF23Q9GZV9 251 aaPredicted RBP20.37■□□□□ 0.85
SOX1-201ENST00000330949 FAM186AA6NE01 2351 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 ZNF891A8MT65 544 aaPredicted RBP20.37■□□□□ 0.85
SOX1-201ENST00000330949 NTF3P20783 257 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 G6PCP35575 357 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 GUSBP11Q6P575 273 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 MOB1BQ7L9L4 216 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 FAM19A2Q8N3H0 131 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 CACNA1EQ15878 2313 aa20.37■□□□□ 0.85
SOX1-201ENST00000330949 K7ERU9 68 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 CIDEAO60543 219 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 HLA-DQA1P01909 254 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 P0C879 139 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 SRFP11831 508 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 CD1BP29016 333 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 CCL7P80098 99 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 MPDU1O75352 247 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 ZDHHC16Q969W1 377 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 FOXB1Q99853 325 aa20.36■□□□□ 0.85
SOX1-201ENST00000330949 SF3B5Q9BWJ5 86 aaKnown RBP20.36■□□□□ 0.85
SOX1-201ENST00000330949 PRRC2CQ9Y520 2896 aaKnown RBP20.36■□□□□ 0.85
SOX1-201ENST00000330949 TMEM238C9JI98 176 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 TOX4O94842 621 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 ZNF439Q8NDP4 499 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 NUDT11Q96G61 164 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 TRGV10A0A0A0MS01 117 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 ARG2P78540 354 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 ZNF718Q3SXZ3 478 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 C11orf52Q96A22 123 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 IGLV3-12A0A075B6K2 115 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 BMPR1BO00238 502 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 LCN12Q6JVE5 192 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 SMIM12Q96EX1 92 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 DLL3Q9NYJ7 618 aa20.35■□□□□ 0.85
SOX1-201ENST00000330949 SYNGR1O43759 233 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 PRR27Q6MZM9 219 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 FGFBP3Q8TAT2 258 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 YTHDF2Q9Y5A9 579 aaKnown RBP20.34■□□□□ 0.85
SOX1-201ENST00000330949 KIAA1549Q9HCM3 1950 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 OR10J4P0C629 311 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 PSG1P11464 419 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 OPRK1P41145 380 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 SELENOVP59797 346 aa20.34■□□□□ 0.85
SOX1-201ENST00000330949 CHCHD2Q9Y6H1 151 aaPredicted RBP20.34■□□□□ 0.85
SOX1-201ENST00000330949 HSBP1L1C9JCN9 74 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 H0YJW9 148 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 RAMP3O60896 148 aa20.33■□□□□ 0.85
SOX1-201ENST00000330949 AMY1AP04745 511 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms