RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 ADH4P08319 380 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 FTH1P19P0C7X4 201 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 LGALS4P56470 323 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 UBE2G1P62253 170 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 SERF2P84101 59 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 Q6ZS52 159 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF525Q8N782 197 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 SPIN2AQ99865 258 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 SPIN2BQ9BPZ2 258 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 ULBP2Q9BZM5 246 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 WDR54Q9H977 334 aa10□□□□□ -0.81
SHMT2-201ENST00000328923 COL5A1P20908 1838 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-201ENST00000328923 TRBV20OR9-2A0A075B6H5 130 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 IGHV4-34P06331 123 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 IGFBP2P18065 325 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 SLC23A3Q6PIS1 610 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 PRR22Q8IZ63 422 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 SLC22A18ASQ8N1D0 253 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 OR8B3Q8NGG8 313 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 NEU4Q8WWR8 484 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-201ENST00000328923 ABHD14BQ96IU4 210 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 OR8B2Q96RD0 313 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 QTRT1Q9BXR0 403 aaKnown RBP9.99□□□□□ -0.81
SHMT2-201ENST00000328923 NECAP2Q9NVZ3 263 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 COPS7AQ9UBW8 275 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 JPT1Q9UK76 154 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 HS3ST3A1Q9Y663 406 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF318Q5VUA4 2279 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF816-ZNF321PA0A0X1KG74 233 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 OR4C46A6NHA9 309 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 PRR33A8MZF0 331 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 CCL2P13500 99 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 HLA-DOBP13765 273 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 DOK3Q7L591 496 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 ZNF439Q8NDP4 499 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 OR13H1Q8NG92 308 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 OR10AG1Q8NH19 301 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 RLN3Q8WXF3 142 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 TMEM45BQ96B21 275 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 RNF183Q96D59 192 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 SPATA25Q9BR10 227 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 SERTAD4Q9NUC0 356 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 IL36BQ9NZH7 164 aa9.99□□□□□ -0.81
SHMT2-201ENST00000328923 UBE2J1Q9Y385 318 aaPredicted RBP9.99□□□□□ -0.81
SHMT2-201ENST00000328923 MS4A18H0YCH9 400 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 NUDT14O95848 222 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 DEFA4P12838 97 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 ID1P41134 155 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 FABP6P51161 128 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 GPM6AP51674 278 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 PLCXD2Q0VAA5 305 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 LRRC75BQ2VPJ9 315 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 MS4A18Q3C1V0 323 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 APOBEC3DQ96AK3 386 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-201ENST00000328923 TMEM222Q9H0R3 208 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 IGKV1D-43A0A0B4J1Z2 117 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-201ENST00000328923 IGLV3-19P01714 112 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 USF1P22415 310 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-201ENST00000328923 IL12BP29460 328 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 ATP5G3P48201 142 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 HIST1H1AQ02539 215 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-201ENST00000328923 PSG7Q13046 419 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 DEFB110Q30KQ9 67 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 ACSM6Q6P461 480 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 OR8B12Q8NGG6 310 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 OR1F12Q8NHA8 337 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 GNB1LQ9BYB4 327 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 CHRNA10Q9GZZ6 450 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 LHFPL6Q9Y693 200 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
SHMT2-201ENST00000328923 A0A0G2JLM5 398 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 FBLL1A6NHQ2 334 aaKnown RBP9.97□□□□□ -0.81
SHMT2-201ENST00000328923 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 LAMTOR5O43504 91 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 GPR183P32249 361 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 PMP22Q01453 160 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 TNXAQ16473 311 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 CCDC71LQ8N9Z2 235 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 PATE1Q8WXA2 126 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 BOKQ9UMX3 212 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-201ENST00000328923 IGKV1-9A0A0C4DH69 117 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 ANKRD30BLA7E2S9 258 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 M0R2Z0 102 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 BMPR1BO00238 502 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 PRKNO60260 465 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-201ENST00000328923 IGKV3-11P04433 115 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 OR1D5P58170 312 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 MYBPHQ13203 477 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 KISS1Q15726 138 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 IGF2-ASQ6U949 168 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 LHFPL2Q6ZUX7 228 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 H1FNTQ75WM6 255 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-201ENST00000328923 SMIM20Q8N5G0 67 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 SCCPDHQ8NBX0 429 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 ABHD17AQ96GS6 310 aa9.97□□□□□ -0.81
SHMT2-201ENST00000328923 MYO7BQ6PIF6 2116 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 TECTAO75443 2155 aa9.96□□□□□ -0.81
SHMT2-201ENST00000328923 UBE2L5PA0A1B0GUS4 154 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms