RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 POU2AF1Q16633 256 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 DHRS7BQ6IAN0 325 aaPredicted RBP12.2□□□□□ -0.46
TPM3-205ENST00000328159 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 LILRB2Q8N423 598 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 C11orf42Q8N5U0 333 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 OR8B3Q8NGG8 313 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 OR10X1Q8NGY0 326 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 OR52E5Q8NH55 327 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
TPM3-205ENST00000328159 RHOVQ96L33 236 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 OR8B2Q96RD0 313 aa12.2□□□□□ -0.46
TPM3-205ENST00000328159 UMAD1C9J7I0 102 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 PPIHO43447 177 aaKnown RBP12.19□□□□□ -0.46
TPM3-205ENST00000328159 LY86O95711 162 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 ZNF616Q08AN1 781 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 TUSC1Q2TAM9 212 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 OR4A47Q6IF82 309 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 OR9G1Q8NH87 305 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 LYPD6BQ8NI32 183 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 MRPL20Q9BYC9 149 aaKnown RBP12.19□□□□□ -0.46
TPM3-205ENST00000328159 NUP50Q9UKX7 468 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 TET2Q6N021 2002 aaPredicted RBP12.19□□□□□ -0.46
TPM3-205ENST00000328159 SMG1Q96Q15 3661 aaKnown RBP12.19□□□□□ -0.46
TPM3-205ENST00000328159 MALRD1Q5VYJ5 2156 aa12.19□□□□□ -0.46
TPM3-205ENST00000328159 FHITP49789 147 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 WDR25Q64LD2 544 aaPredicted RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 FAM71F2Q6NXP2 309 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 ZNF429Q86V71 674 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 THNSL2Q86YJ6 484 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 OR13D1Q8NGV5 346 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 FAM213BQ8TBF2 198 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 SCGB1C1Q8TD33 95 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 TMEM186Q96B77 213 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 UBTD1Q9HAC8 227 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 A0A1W2PPH5 198 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 C15orf61A6NNL5 157 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 PMS2P5A8MQ11 134 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 APOA2P02652 100 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 IGFBP2P18065 325 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 SRSF3P84103 164 aaKnown RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 TAGLNQ01995 201 aaKnown RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 LRRC75BQ2VPJ9 315 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 ABHD12Q8N2K0 398 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 NARS2Q96I59 477 aaKnown RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 CLCC1Q96S66 551 aa12.18□□□□□ -0.46
TPM3-205ENST00000328159 PARD6GQ9BYG4 376 aaPredicted RBP12.18□□□□□ -0.46
TPM3-205ENST00000328159 PPIAL4CA0A0B4J2A2 164 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 H0YJW9 148 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 TSPAN15O95858 294 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 OR8U8P0C7N1 319 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 PPIAL4GP0DN37 164 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 AKR1C1Q04828 323 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 ATP6V1FQ16864 119 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 OR5AN1Q8NGI8 311 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 C8orf46Q8TAG6 207 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 ST6GALNAC6Q969X2 333 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
TPM3-205ENST00000328159 CHODLQ9H9P2 273 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 TCF19Q9Y242 345 aa12.17□□□□□ -0.46
TPM3-205ENST00000328159 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 AGPAT2O15120 278 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 IGKV1-16P04430 117 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 ARG1P05089 322 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 IL6RP08887 468 aaPredicted RBP12.16□□□□□ -0.46
TPM3-205ENST00000328159 VDAC2P45880 294 aaPredicted RBP12.16□□□□□ -0.46
TPM3-205ENST00000328159 REG1BP48304 166 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 ZNF137PP52743 207 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 OR10P1Q8NGE3 313 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 NABP2Q9BQ15 211 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 AIFM2Q9BRQ8 373 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 WDR61Q9GZS3 305 aaKnown RBP12.16□□□□□ -0.46
TPM3-205ENST00000328159 TMEM14BQ9NUH8 114 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 FOXA2Q9Y261 457 aaPredicted RBP12.16□□□□□ -0.46
TPM3-205ENST00000328159 HRNRQ86YZ3 2850 aaPredicted RBP12.16□□□□□ -0.46
TPM3-205ENST00000328159 IGSF10Q6WRI0 2623 aa12.16□□□□□ -0.46
TPM3-205ENST00000328159 TMEM218A2RU14 115 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 A6NNC1 897 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 H7C2Y5 167 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 RBP4P02753 201 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 IL3RAP26951 378 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 CDKN1AP38936 164 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 GNB2P62879 340 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 DIAPH2-AS1Q14236 149 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 AKR1C8PQ5T2L2 129 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 COMMD1Q8N668 190 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 OSR1Q8TAX0 266 aaPredicted RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 TNFRSF14Q92956 283 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 PINX1Q96BK5 328 aaKnown RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 RSG1Q9BU20 258 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 TMEM147Q9BVK8 224 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 HIPK2Q9H2X6 1198 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 TMEM231Q9H6L2 316 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 TREM1Q9NP99 234 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 HEYLQ9NQ87 328 aaPredicted RBP12.15□□□□□ -0.46
TPM3-205ENST00000328159 FAM96BQ9Y3D0 163 aa12.15□□□□□ -0.46
TPM3-205ENST00000328159 FBXO7Q9Y3I1 522 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms