RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 CD300LFQ8TDQ1 290 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 MRGPRDQ8TDS7 321 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 MOB3AQ96BX8 217 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 GALMQ96C23 342 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 METTL8Q9H825 291 aaKnown RBP10.53□□□□□ -0.72
DDX39A-202ENST00000324340 LINC00574Q9H8X3 128 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 PLA2G2EQ9NZK7 142 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 DSCAML1Q8TD84 2053 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 MYO18BQ8IUG5 2567 aa10.53□□□□□ -0.72
DDX39A-202ENST00000324340 DFFBO76075 338 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 PPYP01298 95 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 HBZP02008 142 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 IL2RGP31785 369 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 HTD2P86397 168 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 DPPA3Q6W0C5 159 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 ZNF841Q6ZN19 808 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 TCF23Q7RTU1 214 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 FGFRL1Q8N441 504 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 OR10J5Q8NHC4 309 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 RAB39BQ96DA2 213 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 TVP23CQ96ET8 276 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 PACRGQ96M98 296 aaPredicted RBP10.52□□□□□ -0.72
DDX39A-202ENST00000324340 DCTN5Q9BTE1 182 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 SLC25A31Q9H0C2 315 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 C5orf66Q9H5L9 145 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 KIAA1456Q9P272 454 aa10.52□□□□□ -0.72
DDX39A-202ENST00000324340 TRBV24-1A0A075B6N3 115 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 hADV38S2A0JD32 116 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 F2RL2O00254 374 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 SPINT2O43291 252 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 WNT2P09544 360 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 RD3LP0DJH9 198 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 RPS2P15880 293 aaKnown RBP10.52□□□□□ -0.73
DDX39A-202ENST00000324340 AADACP22760 399 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 COL8A1P27658 744 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 SSTR5P35346 364 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 NPY4RP50391 375 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 SUPT4H1P63272 117 aaKnown RBP10.52□□□□□ -0.73
DDX39A-202ENST00000324340 C17orf58Q2M2W7 97 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 GGNBP1Q5YKI7 109 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 TMEM183AQ8IXX5 376 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 OR1L1Q8NH94 360 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 CTDSP1Q9GZU7 261 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 VAX2Q9UIW0 290 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 UBE2J1Q9Y385 318 aaPredicted RBP10.52□□□□□ -0.73
DDX39A-202ENST00000324340 LINC00312Q9Y6C7 94 aa10.52□□□□□ -0.73
DDX39A-202ENST00000324340 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 RBFOX3A6NFN3 312 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 H3BQ15 152 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 M0R143 59 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 HBE1P02100 147 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 MBP02144 154 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 TAGLN2P37802 199 aaKnown RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 GPR6P46095 362 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 UBE2KP61086 200 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 USF2Q15853 346 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 ANKRD55Q3KP44 614 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 PRR18Q8N4B5 295 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 Q8WTZ3 238 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 IL1F10Q8WWZ1 152 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 RBMXL1Q96E39 390 aaKnown RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 NEIL1Q96FI4 390 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 HIST1H2BLQ99880 126 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 RTBDNQ9BSG5 229 aaPredicted RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 PATZ1Q9HBE1 687 aaKnown RBP10.51□□□□□ -0.73
DDX39A-202ENST00000324340 RAB9BQ9NP90 201 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 CALYQ9NYX4 217 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 OR1A1Q9P1Q5 309 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 CLN8Q9UBY8 286 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 OR2W1Q9Y3N9 320 aa10.51□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF728P0DKX0 622 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 EPHA1P21709 976 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 LOXL3P58215 753 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 S100A10P60903 97 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 HERV-K104P61576 105 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF616Q08AN1 781 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 TMEM30BQ3MIR4 351 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 ZNF525Q8N782 197 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 OR8B3Q8NGG8 313 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 FAM216AQ8WUB2 273 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 ACY3Q96HD9 319 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 OR8B2Q96RD0 313 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 JPT1Q9UK76 154 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
DDX39A-202ENST00000324340 FBXO7Q9Y3I1 522 aa10.5□□□□□ -0.73
DDX39A-202ENST00000324340 IGKV1D-13A0A0B4J2D9 117 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 HSD17B6O14756 317 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 HSPA12AO43301 675 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 KCNAB3O43448 404 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 MBPP02686 304 aaPredicted RBP10.49□□□□□ -0.73
DDX39A-202ENST00000324340 OPN1MWP04001 364 aa10.49□□□□□ -0.73
DDX39A-202ENST00000324340 SRP19P09132 144 aaKnown RBP10.49□□□□□ -0.73
DDX39A-202ENST00000324340 OPN1MW2P0DN77 364 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms