RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 BRS3P32247 399 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 CHRNA7P36544 502 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 GABRA2P47869 451 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 GNG10P50151 68 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 GAGE1Q13065 139 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 ZNF324BQ6AW86 544 aaPredicted RBP13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 Q6ZT83 130 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 OR1L1Q8NH94 360 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 AGMATQ9BSE5 352 aa13.03□□□□□ -0.32
SHROOM1-201ENST00000319854 MLNRO43193 412 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 OR10V1Q8NGI7 309 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 MS4A10Q96PG2 267 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 DCTN5Q9BTE1 182 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 CACNG5Q9UF02 275 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 METRNQ9UJH8 293 aa13.02□□□□□ -0.32
SHROOM1-201ENST00000319854 TRAV17A0A0B4J275 112 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 GGCTO75223 188 aaKnown RBP13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 CECR9P0C854 216 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 PIP4P1Q86T03 277 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 MRGPRDQ8TDS7 321 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 IGF2RP11717 2491 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 LRP5LA4QPB2 252 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 S100GP29377 79 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
SHROOM1-201ENST00000319854 SH2D1BO14796 132 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 HAND1O96004 215 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 OR10J1P30954 320 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 ZNF83P51522 516 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 ACOT6Q3I5F7 207 aaPredicted RBP13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 OR52L2PQ8NGH6 319 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 OR4C12Q96R67 309 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 SLC39A9Q9NUM3 307 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 PPIAL4AQ9Y536 164 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 TACC2O95359 2948 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 GYPAP02724 150 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 CTXN2P0C2S0 81 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 IL3RAP26951 378 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 LRRC75BQ2VPJ9 315 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 TMEM41BQ5BJD5 291 aa13.01□□□□□ -0.33
SHROOM1-201ENST00000319854 DEFA4P12838 97 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 RPL15P61313 204 aaKnown RBP13□□□□□ -0.33
SHROOM1-201ENST00000319854 OR4F5Q8NH21 305 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 OR4F4Q96R69 305 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 PKIBQ9C010 78 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 RYDENQ9NUL5 291 aaKnown RBP13□□□□□ -0.33
SHROOM1-201ENST00000319854 C1QTNF9BB2RNN3 333 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 KRASP01116 189 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 EGR1P18146 543 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 NPPCP23582 126 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 ZNF816Q0VGE8 651 aaPredicted RBP13□□□□□ -0.33
SHROOM1-201ENST00000319854 SPINK9Q5DT21 86 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 FAM78BQ5VT40 261 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 TCF23Q7RTU1 214 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 CISD2Q8N5K1 135 aaKnown RBP13□□□□□ -0.33
SHROOM1-201ENST00000319854 SLC25A22Q9H936 323 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 SH3BGRL2Q9UJC5 107 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 GRIFINA4D1Z8 144 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 K7EM74 188 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 YPEL1O60688 119 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 LINC00614P0C842 121 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 SSTR5P35346 364 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 COTL1Q14019 142 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 WDR31Q8NA23 367 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 OR2Z1Q8NG97 314 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 OR5D13Q8NGL4 314 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 YPEL2Q96QA6 119 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 PSENENQ9NZ42 101 aa13□□□□□ -0.33
SHROOM1-201ENST00000319854 TYMSP04818 313 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 RAC2P15153 192 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 OR5I1Q13606 314 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 TOMM20LQ6UXN7 152 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 Q6ZR03 302 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 Q6ZWC4 215 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 ZCCHC14Q8WYQ9 949 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 SARAFQ96BY9 339 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 PSMG3Q9BT73 122 aaPredicted RBP12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 FAM234AQ9H0X4 552 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 PAM16Q9Y3D7 125 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 TRAPPC1Q9Y5R8 145 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 ATRXP46100 2492 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 M0QZK8 103 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 IFNA1P01562 189 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 IGKV1-39P01597 117 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 IGKV1D-39P04432 117 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 ACSM6Q6P461 480 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 ZNF497Q6ZNH5 498 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 WDR61Q9GZS3 305 aaKnown RBP12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 OR2D2Q9H210 308 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 MANBALQ9NQG1 85 aa12.99□□□□□ -0.33
SHROOM1-201ENST00000319854 IGHV3OR15-7A0A075B7D8 119 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 ZNF320A2RRD8 509 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 H0Y980 276 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 TCF21O43680 179 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 RAMP3O60896 148 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 RBMXL2O75526 392 aaKnown RBP12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 CDKN1AP38936 164 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 ZZEF1O43149 2961 aa12.98□□□□□ -0.33
SHROOM1-201ENST00000319854 UBE2L5PA0A1B0GUS4 154 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms