RNA–Protein interactions for RNA: ENST00000318024.8

USH1C-202, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USH1C, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-202ENST00000318024 S100GP29377 79 aa13.27□□□□□ -0.28
USH1C-202ENST00000318024 TESK1Q15569 626 aa13.27□□□□□ -0.28
USH1C-202ENST00000318024 ANAPC16Q96DE5 110 aa13.27□□□□□ -0.28
USH1C-202ENST00000318024 OBP2BQ9NPH6 170 aa13.27□□□□□ -0.28
USH1C-202ENST00000318024 CADP27708 2225 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 ZNF705GA8MUZ8 300 aaPredicted RBP13.27□□□□□ -0.29
USH1C-202ENST00000318024 LINC00596Q86U02 117 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 OR10J5Q8NHC4 309 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 TMEM18Q96B42 140 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 RPUSD4Q96CM3 377 aaKnown RBP13.27□□□□□ -0.29
USH1C-202ENST00000318024 OR1A1Q9P1Q5 309 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 FUT9Q9Y231 359 aa13.27□□□□□ -0.29
USH1C-202ENST00000318024 POLEQ07864 2286 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 LRP5LA4QPB2 252 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 CCKARP32238 428 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 PAX5Q02548 391 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 TNFRSF9Q07011 255 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 USF2Q15853 346 aaPredicted RBP13.26□□□□□ -0.29
USH1C-202ENST00000318024 ACOT6Q3I5F7 207 aaPredicted RBP13.26□□□□□ -0.29
USH1C-202ENST00000318024 TEX38Q6PEX7 206 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 MKXQ8IYA7 352 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 GBGT1Q8N5D6 347 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 GATAD1Q8WUU5 269 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 TMEM37Q8WXS4 190 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 OR5P3Q8WZ94 311 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 RND1Q92730 232 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 OR5B12Q96R08 314 aa13.26□□□□□ -0.29
USH1C-202ENST00000318024 CTXND1A0A1B0GTU2 59 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 TRAPPC2LH3BP13 241 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 TUBG1P23258 451 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 SRP14P37108 136 aaKnown RBP13.25□□□□□ -0.29
USH1C-202ENST00000318024 RPL15P61313 204 aaKnown RBP13.25□□□□□ -0.29
USH1C-202ENST00000318024 SLC38A11Q08AI6 406 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 NEK7Q8TDX7 302 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 OR51I2Q9H344 312 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 KIR2DL5BA0A0G2JN68 375 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 KIR2DL5BA0A0G2JPC4 375 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 UBE2L5PA0A1B0GUS4 154 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 A0A1W2PPQ1 181 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 PMS2P5A8MQ11 134 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 FAM90A26D6RGX4 464 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 DEGS1O15121 323 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 SELEP16581 610 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 NPPCP23582 126 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 SPANXN5Q5MJ07 72 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 KIR2DL5AQ8N109 375 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 OR2T10Q8NGZ9 312 aa13.25□□□□□ -0.29
USH1C-202ENST00000318024 HEATR1Q9H583 2144 aaKnown RBP13.24□□□□□ -0.29
USH1C-202ENST00000318024 J3QW42 95 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 MLNRO43193 412 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 VENTXO95231 258 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 GYPAP02724 150 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 RAC2P15153 192 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 PSMB3P49720 205 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 IQCJQ1A5X6 159 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 CLEC12BQ2HXU8 276 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 VHLLQ6RSH7 139 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 TMEM144Q7Z5S9 345 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 OR5A2Q8NGI9 324 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 ZNF488Q96MN9 340 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 VKORC1Q9BQB6 163 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 MPC1Q9Y5U8 109 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 ACACBO00763 2458 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 C16orf97H3BN30 126 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 IFNL4K9M1U5 179 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 P0C879 139 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 ERVFC1-1P60608 527 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 C1orf194Q5T5A4 169 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 SLC25A22Q9H936 323 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
USH1C-202ENST00000318024 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 LCN2P80188 198 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 TLE1Q04724 770 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 RDH5Q92781 318 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 ATG101Q9BSB4 218 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 POLR3KQ9Y2Y1 108 aaPredicted RBP13.23□□□□□ -0.29
USH1C-202ENST00000318024 CCL21O00585 134 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 HS3ST1O14792 307 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 HMGB3O15347 200 aaKnown RBP13.23□□□□□ -0.29
USH1C-202ENST00000318024 RAB4AP20338 218 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 CNN1P51911 297 aaKnown RBP13.23□□□□□ -0.29
USH1C-202ENST00000318024 CASP6P55212 293 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 HNF4GQ14541 408 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 MSMPQ1L6U9 139 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 Q6P435 159 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 LRP11Q86VZ4 500 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 ST6GALNAC3Q8NDV1 305 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 MSL2Q9HCI7 577 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 DUSP13Q9UII6 198 aa13.23□□□□□ -0.29
USH1C-202ENST00000318024 TIMM8AO60220 97 aaPredicted RBP13.22□□□□□ -0.29
USH1C-202ENST00000318024 RHBDL1O75783 438 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 CRYAAP02489 173 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 IL3RAP26951 378 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 ESPL1Q14674 2120 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 WDR86Q86TI4 376 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 WFDC8Q8IUA0 241 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 FAM169BQ8N8A8 192 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 JKAMPQ9P055 326 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 HSPB7Q9UBY9 170 aa13.22□□□□□ -0.29
USH1C-202ENST00000318024 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms