RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 OR2D2Q9H210 308 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 PLEKHA3Q9HB20 300 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 C1RLQ9NZP8 487 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SOX21Q9Y651 276 aaPredicted RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 IFNL4K9M1U5 179 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 OR2H2O95918 312 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 HAND1O96004 215 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 PRSS12P56730 875 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TRA2AQ13595 282 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 SLC35E4Q6ICL7 350 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 TMEM191AQ9H0A3 160 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 CLEC1BQ9P126 229 aa4.01□□□□□ -1.77
PTPN13-201ENST00000316707 KIAA0100Q14667 2235 aaKnown RBP4.01□□□□□ -1.77
PTPN13-201ENST00000316707 IGHV2-26A0A0B4J1V2 119 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 HSPB6O14558 160 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 G6PCP35575 357 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 CLDN18P56856 261 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 Q6P435 159 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 VWA1Q6PCB0 445 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 FAM231DQ6ZW35 169 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 TP53TG3Q9ULZ0 132 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 WISP2O76076 250 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 OR5AL1P0C617 328 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 REG1BP48304 166 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 B3GALT5-AS1P59052 145 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 TRIP6Q15654 476 aaKnown RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 Q6ZS52 159 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SMIM12Q96EX1 92 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 C15orf62A8K5M9 175 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 C12orf77C9JDV5 145 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 LINC00310P59036 64 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SSPNQ14714 243 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 TCF23Q7RTU1 214 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 YRDCQ86U90 279 aaKnown RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 FAM103A1Q9BTL3 118 aaKnown RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 TP53BP1Q12888 1972 aaPredicted RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 TRAV38-1A0A0B4J264 116 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 ARL14EPLP0DKL9 152 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SRIP30626 198 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 FOLR3P41439 243 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 TLE1Q04724 770 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 MZT1Q08AG7 82 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 OR1C1Q15619 314 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 FBLN7Q53RD9 439 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 C20orf204Q6ZNR8 217 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 ADTRPQ96IZ2 230 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 V9GYV3 84 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 EGR1P18146 543 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 CD33P20138 364 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 PSMG4Q5JS54 123 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 OR8I2Q8N0Y5 310 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 VPS25Q9BRG1 176 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 DERL1Q9BUN8 251 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PRS3 328 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 IZUMO1RA6ND01 250 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 AQP7O14520 342 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SNRNP200O75643 2136 aaKnown RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 APCSP02743 223 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 COMPP49747 757 aaPredicted RBP4□□□□□ -1.77
PTPN13-201ENST00000316707 SPATA46Q5T0L3 261 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SLC25A34Q6PIV7 304 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 SLC25A45Q8N413 288 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 FAM122AQ96E09 287 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 GGTLC1Q9BX51 225 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 PRRG4Q9BZD6 226 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 ABI3Q9P2A4 366 aa4□□□□□ -1.77
PTPN13-201ENST00000316707 FANCMQ8IYD8 2048 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 IGHV1-45A0A0A0MS14 117 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TRGV8A0A0C4DH27 118 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 BMPR1BO00238 502 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TRAPPC6AO75865 159 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TNFSF15O95150 251 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 NPY1RP25929 384 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TFPI2P48307 235 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 DUSP3P51452 185 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF816Q0VGE8 651 aaPredicted RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 MIC13Q5XKP0 118 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GGNQ86UU5 652 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF114Q8NC26 417 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TMEM70Q9BUB7 260 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 GP6Q9HCN6 339 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 IL36RNQ9UBH0 155 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 LSM4Q9Y4Z0 139 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 M0R1X1 148 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 LINC01565O15544 149 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CDKN1AP38936 164 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 CYB561P49447 251 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 MRPL54Q6P161 138 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 TMEM136Q6ZRR5 245 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 ZNF439Q8NDP4 499 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 RNASE8Q8TDE3 154 aaKnown RBP3.99□□□□□ -1.77
PTPN13-201ENST00000316707 HS3ST6Q96QI5 342 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 NOTCH4Q99466 2003 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 RTTNQ86VV8 2226 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 A0A1W2PS18 150 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 C17orf98A8MV24 154 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 IGLV2-14P01704 120 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 COX6A1P12074 109 aa3.99□□□□□ -1.77
PTPN13-201ENST00000316707 NTF3P20783 257 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms