RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 LEPP41159 167 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 PLSCR2Q9NRY7 297 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 SCO2A0A1W2PP80 73 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 LIPFP07098 398 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 P2RY4P51582 365 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 FGF14Q92915 247 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 WDR34Q96EX3 536 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 IGHV3-72A0A0B4J1Y9 119 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 TMEM249Q2WGJ8 235 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 GPR183P32249 361 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 RNPS1Q15287 305 aaKnown RBP7.55□□□□□ -1.2
USF3-201ENST00000316407 STPG3Q8N7X2 389 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 LEAP2Q969E1 77 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 APOHP02749 345 aaPredicted RBP7.55□□□□□ -1.2
USF3-201ENST00000316407 LRRC75BQ2VPJ9 315 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 GFRALQ6UXV0 394 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 VSTM2AQ8TAG5 236 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 ZP1P60852 638 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 SAMD5Q5TGI4 173 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 OR10J6PQ8NGY7 276 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 NDUFAF3Q9BU61 184 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 TRGV8A0A0C4DH27 118 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 IGLV3-25P01717 112 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 ZNF714Q96N38 554 aa7.55□□□□□ -1.2
USF3-201ENST00000316407 STRCP1A6NGW2 1772 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 ZAR1Q86SH2 424 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 NABP2Q9BQ15 211 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 INSIG2Q9Y5U4 225 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 A0A1W2PRS3 328 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 H0Y980 276 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 NKX2-2O95096 273 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 RAC3P60763 192 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 OR2H1Q9GZK4 316 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 RPS11P62280 158 aaKnown RBP eCLIP7.54□□□□□ -1.2
USF3-201ENST00000316407 ACSF3Q4G176 576 aaPredicted RBP7.54□□□□□ -1.2
USF3-201ENST00000316407 MARCH11A6NNE9 402 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 C10orf128Q5T292 105 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 ZNF818PQ6ZRF7 136 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 DNASE2BQ8WZ79 361 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 SAA1P0DJI8 122 aaPredicted RBP7.54□□□□□ -1.2
USF3-201ENST00000316407 LAMTOR1Q6IAA8 161 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 MGAMO43451 1857 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 TRBV9A0A0B4J1U6 114 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 CX3CL1P78423 397 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 NRN1Q9NPD7 142 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 FOXI3A8MTJ6 420 aaPredicted RBP7.54□□□□□ -1.2
USF3-201ENST00000316407 HLA-DQB1P01920 261 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 LCNL1Q6ZST4 164 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 GPR146Q96CH1 333 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 SLC25A38Q96DW6 304 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 FAM90A27PA6NNH2 459 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 ZG16O60844 167 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 FADS6Q8N9I5 356 aa7.54□□□□□ -1.2
USF3-201ENST00000316407 TNFSF15O95150 251 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 LCN2P80188 198 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 UBALD2Q8IYN6 164 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 OR1L8Q8NGR8 309 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 LPAR2Q9HBW0 351 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 GP6Q9HCN6 339 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 EDA2RQ9HAV5 297 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 PAPPAQ13219 1627 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 A0A1B0GW15 77 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 CACNA1HO95180 2353 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 CEACAM3P40198 252 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 TMEM252Q8N6L7 170 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 DYNLRB2Q8TF09 96 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 SDHCQ99643 169 aaPredicted RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 SS18L1O75177 396 aaPredicted RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 SELENOHQ8IZQ5 122 aaKnown RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 AQP3Q92482 292 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 RCC1LQ96I51 464 aaKnown RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 SERGEFQ9UGK8 458 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 UBE2CO00762 179 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 NPC2P61916 151 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 RPL31P62899 125 aaKnown RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 LSM4Q9Y4Z0 139 aaKnown RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 LIPT2A6NK58 231 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 MPDU1O75352 247 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 TCF24Q7RTU0 167 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 ZNF645Q8N7E2 425 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 OR4A5Q8NH83 315 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 HIST1H2BLQ99880 126 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 ADMP35318 185 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 LCTP09848 1927 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 RRN3P1Q2M238 152 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 ZNF585BQ52M93 769 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 IGHV3-64A0A075B6Q5 118 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 CCL7P80098 99 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 PAX2Q02962 417 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 C2orf68Q2NKX9 166 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 OR6X1Q8NH79 312 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 CENPVL1A0A0U1RR11 272 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 RPL36A-HNRNPH2H7BZ11 118 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 PRTN3P24158 256 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 SLC25A53Q5H9E4 307 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 TIMP4Q99727 224 aa7.53□□□□□ -1.2
USF3-201ENST00000316407 RNASE7Q9H1E1 156 aaKnown RBP7.53□□□□□ -1.2
USF3-201ENST00000316407 ZNF257Q9Y2Q1 563 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms