RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 GABRA6Q16445 453 aa14.38□□□□□ -0.11
SCAMP4-201ENST00000316097 APOBEC3DQ96AK3 386 aaPredicted RBP14.38□□□□□ -0.11
SCAMP4-201ENST00000316097 SDSLQ96GA7 329 aa14.38□□□□□ -0.11
SCAMP4-201ENST00000316097 PTPRQQ9UMZ3 2332 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 LRP5LA4QPB2 252 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 AHRRA9YTQ3 701 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 VENTXO95231 258 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 MBP02144 154 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 GCH1P30793 250 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 STARD4Q96DR4 205 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 FAM215AQ9Y5M1 114 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 IGHV3-64DA0A0J9YX35 117 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 C11orf94C9JXX5 98 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 DEGS1O15121 323 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 FAM87AP0C7U9 286 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 CD33P20138 364 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 TFF3Q07654 80 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 TBR1Q16650 682 aa14.37□□□□□ -0.11
SCAMP4-201ENST00000316097 TRBV6-6A0A0A6YYG2 114 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 CRYAAP02489 173 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 WNT2P09544 360 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 CXorf67Q86X51 503 aaPredicted RBP14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 FGFRL1Q8N441 504 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 TMEM208Q9BTX3 173 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 SSUH2Q9Y2M2 353 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 SMG1Q96Q15 3661 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 DIDO1Q9BTC0 2240 aaKnown RBP14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 HPRT1P00492 218 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 OR3A1P47881 315 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 TGFBR3Q03167 851 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 LINC01551Q86U37 167 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 TMEM147Q9BVK8 224 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 CLN8Q9UBY8 286 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 SH3BGRL2Q9UJC5 107 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 RAXQ9Y2V3 346 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 MSRB2Q9Y3D2 182 aa14.36□□□□□ -0.11
SCAMP4-201ENST00000316097 DLEU1O43261 78 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 RPLP1P05386 114 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 COX5AP20674 150 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 PRR30Q53SZ7 412 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 PPP1R14DQ9NXH3 145 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 GOLT1BQ9Y3E0 138 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 PXMP4Q9Y6I8 212 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 MLNRO43193 412 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 C1QTNF9P0C862 333 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 RELQ04864 619 aaPredicted RBP14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 TCF23Q7RTU1 214 aa14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 ZCCHC14Q8WYQ9 949 aaKnown RBP14.35□□□□□ -0.11
SCAMP4-201ENST00000316097 CHD8Q9HCK8 2581 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 PGPEP1LA6NFU8 196 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 NPSP0C0P6 89 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 SFTPCP11686 197 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 UBE2G2P60604 165 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 ALKBH6Q3KRA9 238 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 TOMM20LQ6UXN7 152 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 FAM58AQ8N1B3 248 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 NANOS1Q8WY41 292 aaKnown RBP14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 OR5P3Q8WZ94 311 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 PLSCR4Q9NRQ2 329 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 GRIFINA4D1Z8 144 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 FAM90A26D6RGX4 464 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 K7ENP7 123 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 INO80CQ6PI98 192 aaPredicted RBP14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 TMEM144Q7Z5S9 345 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 DRAM1Q8N682 238 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 WDR31Q8NA23 367 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 Q8NA96 180 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 DERL1Q9BUN8 251 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 OR2J1Q9GZK6 312 aa14.34□□□□□ -0.11
SCAMP4-201ENST00000316097 KRASP01116 189 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 CGAP01215 116 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 IRF2P14316 349 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 ADMP35318 185 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 GNB1P62873 340 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 LINC00596Q86U02 117 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF709Q8N972 641 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 OR5A2Q8NGI9 324 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 CMTM2Q8TAZ6 248 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 IMMP2LQ96T52 175 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 NPCDR1Q9BY65 106 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 TLN1Q9Y490 2541 aaKnown RBP14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 ADGRG4Q8IZF6 3080 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 DLL1O00548 723 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 CA6P23280 308 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 TDRG1Q3Y452 100 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 ZNF573Q86YE8 665 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 OR1L1Q8NH94 360 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 SGMS2Q8NHU3 365 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 PROCRQ9UNN8 238 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 NCOR2Q9Y618 2525 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 DOCK11Q5JSL3 2073 aa14.33□□□□□ -0.12
SCAMP4-201ENST00000316097 NPIPB11E5RHQ5 1161 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 M0QZK8 103 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 CRYABP02511 175 aaKnown RBP14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 G6PCP35575 357 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 ATP5G3P48201 142 aa14.32□□□□□ -0.12
SCAMP4-201ENST00000316097 ATP6V1FQ16864 119 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms