RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 IFI6P09912 130 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 COL10A1Q03692 680 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 DIRC2Q96SL1 478 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 TINAGQ9UJW2 476 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 TBL2Q9Y4P3 447 aaKnown RBP7.03□□□□□ -1.28
VPS41-202ENST00000310301 C17orf82Q86X59 251 aaPredicted RBP7.03□□□□□ -1.28
VPS41-202ENST00000310301 NUP37Q8NFH4 326 aa7.03□□□□□ -1.28
VPS41-202ENST00000310301 GPR179Q6PRD1 2367 aa7.02□□□□□ -1.28
VPS41-202ENST00000310301 C1QCP02747 245 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 SSTR5P35346 364 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 OR8G5Q8NG78 346 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 OR4D5Q8NGN0 318 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 FBLIM1Q8WUP2 373 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 OR2H1Q9GZK4 316 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 JKAMPQ9P055 326 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 CEACAM18A8MTB9 384 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 ISG15P05161 165 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 NGFRP08138 427 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 ATP5J2P56134 94 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 GFRA1P56159 465 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 PSG6Q00889 435 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 ZAR1Q86SH2 424 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 SELENOHQ8IZQ5 122 aaKnown RBP7.02□□□□□ -1.29
VPS41-202ENST00000310301 ZNF721Q8TF20 911 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 ABHD14BQ96IU4 210 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 MEGF9Q9H1U4 602 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 SIP14410 1827 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 A0A1W2PPE3 182 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 J3QT63 122 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 PLAUP00749 431 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 CRYBB3P26998 211 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 TNFRSF9Q07011 255 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 C19orf54Q5BKX5 351 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 MRPL14Q6P1L8 145 aaKnown RBP7.02□□□□□ -1.29
VPS41-202ENST00000310301 NDUFAF3Q9BU61 184 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 NPDC1Q9NQX5 325 aaPredicted RBP7.02□□□□□ -1.29
VPS41-202ENST00000310301 RNF115Q9Y4L5 304 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 PATJQ8NI35 1801 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 DSPPQ9NZW4 1301 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 NFAM1Q8NET5 270 aaPredicted RBP7.02□□□□□ -1.29
VPS41-202ENST00000310301 CCL19Q99731 98 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 NRTNQ99748 197 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 KLK15Q9H2R5 256 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 LINC00869P0C866 280 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 FSTP19883 344 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 RPS11P62280 158 aaKnown RBP eCLIP7.02□□□□□ -1.29
VPS41-202ENST00000310301 MEF2CQ06413 473 aaPredicted RBP7.02□□□□□ -1.29
VPS41-202ENST00000310301 MAJINQ3KP22 176 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 OR4C13Q8NGP0 309 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 AQP3Q92482 292 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 SPSB4Q96A44 273 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 GPR146Q96CH1 333 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 PIMREGQ9BSJ6 248 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 GP6Q9HCN6 339 aa7.02□□□□□ -1.29
VPS41-202ENST00000310301 ZFC3H1O60293 1989 aaKnown RBP7.01□□□□□ -1.29
VPS41-202ENST00000310301 TYMSP04818 313 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 ZP1P60852 638 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 TM4SF20Q53R12 229 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 FBLN7Q53RD9 439 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 FBXW9Q5XUX1 488 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 MOGAT3Q86VF5 341 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 WFDC3Q8IUB2 231 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 SLC25A40Q8TBP6 338 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 SRSF12Q8WXF0 261 aaKnown RBP7.01□□□□□ -1.29
VPS41-202ENST00000310301 PRSS27Q9BQR3 290 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 TMEM160Q9NX00 188 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 IGHV3OR15-7A0A075B7D8 119 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 TRAV8-6A0A0B4J262 113 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 TRBV5-5A0A0J9YX44 114 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 A0A1W2PP11 408 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 FAM53AQ6NSI3 398 aaPredicted RBP7.01□□□□□ -1.29
VPS41-202ENST00000310301 RNASE6Q93091 150 aaKnown RBP7.01□□□□□ -1.29
VPS41-202ENST00000310301 WDYHV1Q96HA8 205 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 KCNS1Q96KK3 526 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 ZNF488Q96MN9 340 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 LINC00470Q9BZP3 86 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 C5orf66Q9H5L9 145 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 TIAF1O95411 115 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 SCTP09683 121 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 LAMTOR1Q6IAA8 161 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 IMMP2LQ96T52 175 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 LAMTOR2Q9Y2Q5 125 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 FUT5Q11128 374 aa7.01□□□□□ -1.29
VPS41-202ENST00000310301 SSBP3Q9BWW4 388 aaPredicted RBP7.01□□□□□ -1.29
VPS41-202ENST00000310301 H3BUT2 72 aa7□□□□□ -1.29
VPS41-202ENST00000310301 HRKO00198 91 aa7□□□□□ -1.29
VPS41-202ENST00000310301 CA11O75493 328 aa7□□□□□ -1.29
VPS41-202ENST00000310301 PGLYRP1O75594 196 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 LIPFP07098 398 aa7□□□□□ -1.29
VPS41-202ENST00000310301 HIST1H1AQ02539 215 aaPredicted RBP7□□□□□ -1.29
VPS41-202ENST00000310301 CD200R1LQ6Q8B3 271 aa7□□□□□ -1.29
VPS41-202ENST00000310301 IGF2-ASQ6U949 168 aa7□□□□□ -1.29
VPS41-202ENST00000310301 C9orf40Q8IXQ3 194 aa7□□□□□ -1.29
VPS41-202ENST00000310301 ZNF414Q96IQ9 312 aa7□□□□□ -1.29
VPS41-202ENST00000310301 INSIG2Q9Y5U4 225 aa7□□□□□ -1.29
VPS41-202ENST00000310301 IFNL4K9M1U5 179 aa7□□□□□ -1.29
VPS41-202ENST00000310301 TGFAP01135 160 aa7□□□□□ -1.29
VPS41-202ENST00000310301 EGR1P18146 543 aa7□□□□□ -1.29
VPS41-202ENST00000310301 RIPPLY2Q5TAB7 128 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms