RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PPP1R1AQ13522 171 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 KIAA0141Q14154 515 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 USMG5Q96IX5 58 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 YPEL2Q96QA6 119 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 NRN1Q9NPD7 142 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CHCHD2Q9Y6H1 151 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 EML5Q05BV3 1969 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 TET2Q6N021 2002 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 PCDH15Q96QU1 1955 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 A0A1B0GUS0 222 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FAM221AA4D161 298 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 OR4C46A6NHA9 309 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 M0R1W7 72 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 AMBPP02760 352 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 JOSD1Q15040 202 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 GUCA2BQ16661 112 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 C1orf100Q5SVJ3 147 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SPSB3Q6PJ21 355 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 OLIG3Q7RTU3 272 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SSC4DQ8WTU2 575 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 UCN2Q96RP3 112 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 H0Y8G0 127 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 MOSP00540 346 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 NTF3P20783 257 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 METAP1P53582 386 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 GAPTQ8N292 157 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 C8orf46Q8TAG6 207 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 MRGPRFQ96AM1 343 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 MRAP2Q96G30 205 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 THSD7BQ9C0I4 1608 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 E9PQ18 207 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 WISP3O95389 354 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 GYPAP02724 150 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 PEBP1P30086 187 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 BSPH1Q075Z2 132 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF738Q8NE65 137 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ZNF385AQ96PM9 386 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 C1QTNF5Q9BXJ0 243 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ZC3H12DA2A288 527 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RBFOX3A6NFN3 312 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SLC25A17O43808 307 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 DNAL4O96015 105 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CD99P14209 185 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 AGAP20933 346 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ANOS1P23352 680 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 DYNLT3P51808 116 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 PMCHL1Q16048 86 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 WDR25Q64LD2 544 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FAM71F2Q6NXP2 309 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 APCDD1LQ8NCL9 501 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RNF166Q96A37 237 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 MEGF10Q96KG7 1140 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 OR51M1Q9H341 326 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FSCN3Q9NQT6 498 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RBFOX2O43251 390 aaKnown RBP eCLIP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 UPK3AO75631 287 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RHBDL1O75783 438 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SOD3P08294 240 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 GLI4P10075 376 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CCL2P13500 99 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CKS2P33552 79 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SEC11AP67812 179 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 TEX38Q6PEX7 206 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 THSD4Q6ZMP0 1018 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 BCDIN3DQ7Z5W3 292 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RELL2Q8NC24 303 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 OR5P3Q8WZ94 311 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 REPIN1Q9BWE0 567 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ZMIZ1Q9ULJ6 1067 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ZFP30Q9Y2G7 519 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 HILPDAQ9Y5L2 63 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 IGHV3-64DA0A0J9YX35 117 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 WNT1P04628 370 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 C8orf88P0DMB2 117 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 CSF2RBP32927 897 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 BLNKQ8WV28 456 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 GEMIN7Q9H840 131 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FLRT3Q9NZU0 649 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ING1Q9UK53 422 aaPredicted RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ARL2-SNX15V9GYD0 113 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 PGPA6NDG6 321 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 TNFSF13O75888 250 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 EFEMP2O95967 443 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 LINC00869P0C866 280 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 FAM157CP0CG43 387 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 MYF5P13349 255 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 HNRNPA3P51991 378 aaKnown RBP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 RPS11P62280 158 aaKnown RBP eCLIP2.73□□□□□ -1.97
CLOCK-201ENST00000309964 IGF2-ASQ6U949 168 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 IGFL3Q6UXB1 125 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 LHFPL5Q8TAF8 219 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 ITLN1Q8WWA0 313 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 SSMEM1Q8WWF3 244 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 VCX2Q9H322 139 aa2.73□□□□□ -1.97
CLOCK-201ENST00000309964 DEFB108AA8MXU0 73 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 M0R3E3 92 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 KBTBD11O94819 623 aa2.72□□□□□ -1.97
CLOCK-201ENST00000309964 IL6RP08887 468 aaPredicted RBP2.72□□□□□ -1.97
CLOCK-201ENST00000309964 ARF6P62330 175 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms