RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 TRAV34A0A0B4J273 112 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 STAG3L3P0CL85 134 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 APELAP0DMC3 54 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 OR13C6PQ8NH95 151 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 ABHD14BQ96IU4 210 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 PLXNB1O43157 2135 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 ANKRD11Q6UB99 2663 aaPredicted RBP7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 HPXP02790 462 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 FGF12P61328 243 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 OR4C13Q8NGP0 309 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 CEACAM18A8MTB9 384 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 AP4M1O00189 453 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 GPX1P07203 203 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 SUCLG1P53597 346 aaKnown RBP7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 CDCP2Q5VXM1 449 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 NUDT11Q96G61 164 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 MRPL13Q9BYD1 178 aaKnown RBP7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 MTFP1Q9UDX5 166 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 A0A0G2JLM5 398 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 CKS2P33552 79 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 C3AR1Q16581 482 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 OTPQ5XKR4 325 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 C8orf82Q6P1X6 216 aaPredicted RBP7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 RBFOX3A6NFN3 312 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 DLX6P56179 175 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 CCL8P80075 99 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 MYO9AB2RTY4 2548 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC25A20O43772 301 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 FGF8P55075 233 aaPredicted RBP7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 COL10A1Q03692 680 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 DHRS2Q13268 280 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF56Q15929 161 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 LINC00469Q8N7U9 141 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 ADAMTS17Q8TE56 1095 aa7.17□□□□□ -1.26
PCDHB1-201ENST00000306549 TMSB15BA0A087X1C1 80 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 AESQ08117 197 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 FAM159AQ6UWV7 190 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CNTD2Q9H8S5 307 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CD99P14209 185 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 DPPA3Q6W0C5 159 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 SLC16A13Q7RTY0 426 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM52Q8NDY8 209 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 WDFY2Q96P53 400 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 MAP1LC3AQ9H492 121 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PRSS50Q9UI38 385 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 H7C2G1 150 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 GGCTO75223 188 aaKnown RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CTAG2O75638 210 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TCL1AP56279 114 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 UBE2DNLQ8IWF7 75 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 OR5AU1Q8NGC0 362 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 HSF4Q9ULV5 492 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 BOLA1Q9Y3E2 137 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 K7ENP7 123 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 HOXA3O43365 443 aaPredicted RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 THY1P04216 161 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 GZMKP49863 264 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PLA2G2CQ5R387 149 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 LRRC75AQ8NAA5 344 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PEMTQ9UBM1 199 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 HSPB7Q9UBY9 170 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 MRM2Q9UI43 246 aaKnown RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TIAF1O95411 115 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 RPLP1P05386 114 aaKnown RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 RD3LP0DJH9 198 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 NPPCP23582 126 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CX3CL1P78423 397 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CFAP161Q6P656 301 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 WDFY1Q8IWB7 410 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 NPVFQ9HCQ7 196 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PPYP01298 95 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PATE4P0C8F1 98 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 LIMS1P48059 325 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 PPP1R1AQ13522 171 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TBR1Q16650 682 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 DMKNQ6E0U4 476 aaPredicted RBP7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM88Q6PEY1 159 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 LDLRAD3Q86YD5 345 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 GPR82Q96P67 336 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 IGHV1-69-2A0A0G2JMI3 117 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 OR4C45A6NMZ5 311 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 GDF9O60383 454 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 RTN4RL2Q86UN3 420 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 TMEM54Q969K7 222 aa7.16□□□□□ -1.26
PCDHB1-201ENST00000306549 REG1BP48304 166 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 RPL8P62917 257 aaKnown RBP7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 RAB32Q13637 225 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 SMUG1Q53HV7 270 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 CLRN3Q8NCR9 226 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 CBLN4Q9NTU7 201 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 LOC389332A0A1B0GUA5 103 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 LY6EQ16553 131 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 ZNF680Q8NEM1 530 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 OR10D4PQ8NGN7 298 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 SORL1Q92673 2214 aa7.15□□□□□ -1.26
PCDHB1-201ENST00000306549 CTXND1A0A1B0GTU2 59 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms