RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 RBPJQ06330 500 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 LRRC10Q5BKY1 277 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 WDFY1Q8IWB7 410 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 HARBI1Q96MB7 349 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 QTRT1Q9BXR0 403 aaKnown RBP11.26□□□□□ -0.61
DDX54-201ENST00000306014 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
DDX54-201ENST00000306014 KIAA1671Q9BY89 1806 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 RBP4P02753 201 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 CBLN1P23435 193 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 CSN1S1P47710 185 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 RPL23P62829 140 aaKnown RBP11.25□□□□□ -0.61
DDX54-201ENST00000306014 PAFAH1B2P68402 229 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 OR4C5Q8NGB2 326 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 OR1B1Q8NGR6 318 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 TMEM45BQ96B21 275 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 TMEM140Q9NV12 185 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 TIMM9Q9Y5J7 89 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 SPTBN1Q01082 2364 aaKnown RBP11.25□□□□□ -0.61
DDX54-201ENST00000306014 CSN3P07498 182 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 REG1BP48304 166 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 MFAP2P55001 183 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 HIST3H3Q16695 136 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 PLPPR1Q8TBJ4 325 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 GAL3ST2Q9H3Q3 398 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 ZNF703Q9H7S9 590 aaPredicted RBP11.25□□□□□ -0.61
DDX54-201ENST00000306014 LOC102723996A0A087X1L8 192 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 FOXG1P55316 489 aaPredicted RBP11.25□□□□□ -0.61
DDX54-201ENST00000306014 FXYD3Q14802 87 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 COX19Q49B96 90 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 OR2D3Q8NGH3 330 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 OR1L4Q8NGR5 311 aa11.25□□□□□ -0.61
DDX54-201ENST00000306014 LRRK1Q38SD2 2015 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 TRAV24A0A0B4J272 114 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 APELAP0DMC3 54 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 PYY3Q5JQD4 70 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 PDPNQ86YL7 162 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 SFRP2Q96HF1 295 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 TXNDC17Q9BRA2 123 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 COL4A3Q01955 1670 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 PQLC2Q6ZP29 291 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 OR51G1Q8NGK1 321 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 DEPPQ9NTK1 212 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 BET1LQ9NYM9 111 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 COL4A4P53420 1690 aaPredicted RBP11.24□□□□□ -0.61
DDX54-201ENST00000306014 AKAP6Q13023 2319 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 SLC31A2O15432 143 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 KLF7O75840 302 aaPredicted RBP11.24□□□□□ -0.61
DDX54-201ENST00000306014 APCSP02743 223 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 ATP5G3P48201 142 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 RNF7Q9UBF6 113 aa11.24□□□□□ -0.61
DDX54-201ENST00000306014 SOD3P08294 240 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 ABLIM2Q6H8Q1 611 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
DDX54-201ENST00000306014 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 CRYBB3P26998 211 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 Q56UQ5 140 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 OR2V2Q96R30 315 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 ATG101Q9BSB4 218 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 C1QTNF9BB2RNN3 333 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 VENTXO95231 258 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 HTR1DP28221 377 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 OTX1P32242 354 aaPredicted RBP11.23□□□□□ -0.61
DDX54-201ENST00000306014 LGALS4P56470 323 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 HGFACQ04756 655 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 ATP1A1-AS1Q5TC04 95 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
DDX54-201ENST00000306014 P2RY6Q15077 328 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 LBHQ53QV2 105 aaPredicted RBP11.23□□□□□ -0.61
DDX54-201ENST00000306014 NMSQ5H8A3 153 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 SMIM15Q7Z3B0 74 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 HIST1H2BLQ99880 126 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
DDX54-201ENST00000306014 A0A1W2PN81 502 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 CBY3A6NI87 242 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 RAMP3O60896 148 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 C21orf62-AS1Q17RA5 79 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 IBA57Q5T440 356 aaKnown RBP11.22□□□□□ -0.61
DDX54-201ENST00000306014 NHLRC2Q8NBF2 726 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 GATAD1Q8WUU5 269 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 IMMP2LQ96T52 175 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 NEURL1O76050 574 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 NRN1LQ496H8 165 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 C10orf113Q5VZT2 155 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 LIME1Q9H400 295 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 SLC17A3O00476 420 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 PLAUP00749 431 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 FTH1P19P0C7X4 201 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 RPL39P5Q59GN2 51 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
DDX54-201ENST00000306014 ZNF324BQ6AW86 544 aaPredicted RBP11.22□□□□□ -0.61
DDX54-201ENST00000306014 C1QL4Q86Z23 238 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 MMD2Q8IY49 270 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 VSTM2AQ8TAG5 236 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
DDX54-201ENST00000306014 CCL13Q99616 98 aa11.22□□□□□ -0.61
DDX54-201ENST00000306014 CELA3BP08861 270 aa11.21□□□□□ -0.61
DDX54-201ENST00000306014 LYZP61626 148 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms