RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 RTL8AQ9BWD3 113 aa13.53□□□□□ -0.24
LONRF3-201ENST00000304778 TRAPPC2LQ9UL33 140 aa13.53□□□□□ -0.24
LONRF3-201ENST00000304778 SMPD2O60906 423 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 ZNF16P17020 682 aaPredicted RBP13.52□□□□□ -0.24
LONRF3-201ENST00000304778 GCH1P30793 250 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 FOXF2Q12947 444 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 MRGPRGQ86SM5 289 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 Q8IYB0 196 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 ZADH2Q8N4Q0 377 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 CISD2Q8N5K1 135 aaKnown RBP13.52□□□□□ -0.24
LONRF3-201ENST00000304778 MSL2Q9HCI7 577 aa13.52□□□□□ -0.24
LONRF3-201ENST00000304778 YLPM1P49750 1951 aaKnown RBP13.52□□□□□ -0.24
LONRF3-201ENST00000304778 WDR86Q86TI4 376 aa13.52□□□□□ -0.25
LONRF3-201ENST00000304778 PARD6GQ9BYG4 376 aaPredicted RBP13.52□□□□□ -0.25
LONRF3-201ENST00000304778 ITGB1BP1O14713 200 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 CCL25O15444 150 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 WDR1O75083 606 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 KBTBD11O94819 623 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 PTTG1IPP53801 180 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 PPP1CBP62140 327 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 MRPL49Q13405 166 aaKnown RBP13.51□□□□□ -0.25
LONRF3-201ENST00000304778 LEMD1Q68G75 181 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 CENPVQ7Z7K6 275 aaPredicted RBP13.51□□□□□ -0.25
LONRF3-201ENST00000304778 WDR61Q9GZS3 305 aaKnown RBP13.51□□□□□ -0.25
LONRF3-201ENST00000304778 TMEM106BQ9NUM4 274 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 ERVK11-1P61568 191 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 TMEM41BQ5BJD5 291 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 MBNL3Q9NUK0 354 aaKnown RBP13.51□□□□□ -0.25
LONRF3-201ENST00000304778 POLDIP2Q9Y2S7 368 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 CACNA1GO43497 2377 aa13.51□□□□□ -0.25
LONRF3-201ENST00000304778 ZNF737O75373 536 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 AGFG2O95081 481 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 CEACAM8P31997 349 aaPredicted RBP13.5□□□□□ -0.25
LONRF3-201ENST00000304778 TPTE2P1Q5T6R2 138 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 TEX43Q6ZNM6 134 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 DRAM1Q8N682 238 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 SCCPDHQ8NBX0 429 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 SLC35E1Q96K37 410 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 YPEL1O60688 119 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 MMDQ15546 238 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 TMEM183BQ1AE95 376 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 SPANXN5Q5MJ07 72 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 INO80CQ6PI98 192 aaPredicted RBP13.5□□□□□ -0.25
LONRF3-201ENST00000304778 Q6ZWC4 215 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 PINX1Q96BK5 328 aaKnown RBP13.5□□□□□ -0.25
LONRF3-201ENST00000304778 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 VAMP8Q9BV40 100 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 TRAPPC1Q9Y5R8 145 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 FAM90A26D6RGX4 464 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 SLC25A40Q8TBP6 338 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 AGMATQ9BSE5 352 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 WIPI2Q9Y4P8 454 aa13.5□□□□□ -0.25
LONRF3-201ENST00000304778 DCHS1Q96JQ0 3298 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 IFNA1P01562 189 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 TYMSP04818 313 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 VN1R17PQ8TDU5 208 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 OR4C12Q96R67 309 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 MANBALQ9NQG1 85 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 DKK4Q9UBT3 224 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 AKAP13Q12802 2813 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 RNF212BA8MTL3 300 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 J3QW42 95 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 IGKV1D-33P01593 117 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 IGKV1-33P01594 117 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 IL3RAP26951 378 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 CDKN1AP38936 164 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 CDKN1BP46527 198 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 SELENOTP62341 195 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 MEF2BQ02080 365 aaPredicted RBP13.49□□□□□ -0.25
LONRF3-201ENST00000304778 ZNF146Q15072 292 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 WDR31Q8NA23 367 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 CMTM2Q8TAZ6 248 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
LONRF3-201ENST00000304778 IMMP2LQ96T52 175 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 PARLQ9H300 379 aa13.49□□□□□ -0.25
LONRF3-201ENST00000304778 UBE2L5PA0A1B0GUS4 154 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 AHRRA9YTQ3 701 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 EGR1P18146 543 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 COX5AP20674 150 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 CHRNA7P36544 502 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 SLC38A11Q08AI6 406 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 FGFRL1Q8N441 504 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 STPG4Q8N801 248 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 CIB3Q96Q77 187 aaPredicted RBP13.48□□□□□ -0.25
LONRF3-201ENST00000304778 CEP295Q9C0D2 2601 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 A0A0U1RQK1 487 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 ZNF320A2RRD8 509 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 GRIFINA4D1Z8 144 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 NXPH2O95156 264 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 NDUFB8O95169 186 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 HNF1AP20823 631 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 RANP62826 216 aaKnown RBP13.48□□□□□ -0.25
LONRF3-201ENST00000304778 RNF151Q2KHN1 245 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 FAM78BQ5VT40 261 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 LAMA5O15230 3695 aa13.48□□□□□ -0.25
LONRF3-201ENST00000304778 NKX6-3A6NJ46 265 aa13.47□□□□□ -0.25
LONRF3-201ENST00000304778 KLK10O43240 276 aa13.47□□□□□ -0.25
LONRF3-201ENST00000304778 HOXC12P31275 282 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms